RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 RIOK2Q9BVS4 552 aaKnown RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 NMNAT1Q9HAN9 279 aaPredicted RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 SPIN1Q9Y657 262 aaPredicted RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 FABP12A6NFH5 140 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 PRAMEF25A6NGN4 478 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 MYL12BO14950 172 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 SCAMP2O15127 329 aaKnown RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 SCN2BO60939 215 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 SLITRK5O94991 958 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 PSMA1P25786 263 aaKnown RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CTSCP53634 463 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 MLLT1Q03111 559 aaPredicted RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CLEC12AQ5QGZ9 265 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CYB5D2Q8WUJ1 264 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CLP1Q92989 425 aaKnown RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 NEIL2Q969S2 332 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 SLC12A9Q9BXP2 914 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 COQ3Q9NZJ6 369 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CLEC4AQ9UMR7 237 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 HSPE1-MOB4S4R3N1 261 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 ZSWIM8A7E2V4 1837 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 H7C4K7 107 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 GCM2O75603 506 aaPredicted RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CYP17A1P05093 508 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 OR2G6Q5TZ20 316 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 ERAP2Q6P179 960 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 LRRC70Q7Z2Q7 622 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 TSEN54Q7Z6J9 526 aaKnown RBP16.16■□□□□ 0.18
SGPP1-201ENST00000247225 CFAP206Q8IYR0 622 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 LILRB4Q8NHJ6 448 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 ENKURQ8TC29 256 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 ARMC5Q96C12 935 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 TM9SF2Q99805 663 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 TEKT2Q9UIF3 430 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 POFUT2Q9Y2G5 429 aa16.16■□□□□ 0.18
SGPP1-201ENST00000247225 MEIOCA2RUB1 952 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 WASHC1A8K0Z3 465 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 MEN1O00255 615 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 HOXC11O43248 304 aaPredicted RBP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 PSKH1P11801 424 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 ANXA8P13928 327 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 SLBPQ14493 270 aaKnown RBP eCLIP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 BCL2A1Q16548 175 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 WASH2PQ6VEQ5 465 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 FAM9CQ8IZT9 166 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 OR2AP1Q8NGE2 309 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 FBLIM1Q8WUP2 373 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 PCNPQ8WW12 178 aaKnown RBP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 XAGE5Q8WWM1 108 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 IRF2BPLQ9H1B7 796 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 SUV39H2Q9H5I1 410 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 FAM120CQ9NX05 1096 aaKnown RBP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 CFL2Q9Y281 166 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 Q9Y3F1 56 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 PCDHGA2Q9Y5H1 932 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 SRCP12931 536 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 CYBAP13498 195 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 HMGA1P17096 107 aaKnown RBP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 ATP6V1E1P36543 226 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 RECQLP46063 649 aaPredicted RBP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 HTR3AP46098 478 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 ACLYP53396 1101 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 CNTN1Q12860 1018 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 C5orf22Q49AR2 442 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 TRAPPC5Q8IUR0 188 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 NACC2Q96BF6 587 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 EFHD2Q96C19 240 aaPredicted RBP16.15■□□□□ 0.18
SGPP1-201ENST00000247225 STARD7Q9NQZ5 370 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 HCN4Q9Y3Q4 1203 aa16.15■□□□□ 0.18
SGPP1-201ENST00000247225 FADS2P1A8MWK0 482 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 H3BQ06 376 aaPredicted RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 TLR4O00206 839 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 PSIP1O75475 530 aaKnown RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 TNFRSF21O75509 655 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 CCNYL3P0C7X3 344 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 ALDH6A1Q02252 535 aaKnown RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 PIN1Q13526 163 aaPredicted RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 SSX1Q16384 188 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 ADCK2Q7Z695 626 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 SYNPOQ8N3V7 929 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 TP53I13Q8NBR0 393 aaPredicted RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 SOCS4Q8WXH5 440 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 TBC1D17Q9HA65 648 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 TBC1D24Q9ULP9 559 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 ITM2BQ9Y287 266 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 YIPF1Q9Y548 306 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 TET1Q8NFU7 2136 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 A0A1W2PQL4 384 aaPredicted RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 SCAMP1O15126 338 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 NCR1O76036 304 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 ZDHHC11BP0C7U3 371 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 IDSP22304 550 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 RNF144AP50876 292 aaPredicted RBP16.14■□□□□ 0.17
SGPP1-201ENST00000247225 SPHARQ15513 63 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 BRAT1Q6PJG6 821 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 LYPD8Q6UX82 237 aa16.14■□□□□ 0.17
SGPP1-201ENST00000247225 CEACAM20Q6UY09 585 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms