RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 TMEM201Q5SNT2 666 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 ZNF770Q6IQ21 691 aaPredicted RBP13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 TRIM48Q8IWZ4 208 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 CBARPQ8N350 705 aaPredicted RBP13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 C1orf52Q8N6N3 182 aaKnown RBP13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 KLHL6Q8WZ60 621 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 ARHGAP39Q9C0H5 1083 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 GIMAP4Q9NUV9 329 aa13.4□□□□□ -0.26
SCNN1A-201ENST00000228916 FABP12A6NFH5 140 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 RNASET2O00584 256 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 GADD45GO95257 159 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 IL1AP01583 271 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CPN2P22792 545 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 HNF1BP35680 557 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PFN3P60673 137 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 HOXC5Q00444 222 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 B4GALNT1Q00973 533 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 SCARB2Q14108 478 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 NCF4Q15080 339 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 DGKKQ5KSL6 1271 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 RNLSQ5VYX0 342 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ZNF852Q6ZMS4 543 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ZNF783Q6ZMS7 281 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 FAM217AQ8IXS0 508 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CLDN22Q8N7P3 220 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 YIPF7Q8N8F6 280 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 KIAA1143Q96AT1 154 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TMEM80Q96HE8 168 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 MTERF1Q99551 399 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 P2RY13Q9BPV8 354 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 MND1Q9BWT6 205 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 NDOR1Q9UHB4 597 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 SSR3Q9UNL2 185 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 WWP2O00308 870 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 STC2O76061 302 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PKLRP30613 574 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 OR3A3P47888 321 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 IRF8Q02556 426 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 EEF1A2Q05639 463 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 MLLT11Q13015 90 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 GPR17Q13304 367 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PDZK1Q5T2W1 519 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ADGRF1Q5T601 910 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TPGS1Q6ZTW0 290 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PHC2Q8IXK0 858 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 SLC34A3Q8N130 599 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 NANOGP1Q8N7R0 232 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 OR4A15Q8NGL6 344 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 OR6K2Q8NGY2 324 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 GOT1L1Q8NHS2 421 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 WBP2Q969T9 261 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TRAF4Q9BUZ4 470 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 NMNAT1Q9HAN9 279 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ZDHHC3Q9NYG2 299 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PLEKHB1Q9UF11 243 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PRAMEF33A0A0G2JMD5 474 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 A0A1W2PQL4 384 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 GFYI3L273 518 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 PRAMEF10O60809 474 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CDRT1O95170 752 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CSF2P04141 144 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 SRCP12931 536 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CYBAP13498 195 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 MBTPS1Q14703 1052 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 QPRTQ15274 297 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TAF1CQ15572 869 aaPredicted RBP13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CYP27C1Q4G0S4 372 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 CRB2Q5IJ48 1285 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 ELMOD2Q8IZ81 293 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 OR52N2Q8NGI0 321 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 NFKBIDQ8NI38 313 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 SNAPC3Q92966 411 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 IL4I1Q96RQ9 567 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TM6SF2Q9BZW4 377 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 FAM83DQ9H4H8 585 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 TMEM38AQ9H6F2 299 aa13.39□□□□□ -0.27
SCNN1A-201ENST00000228916 LOC105371267A0A1B0GV96 52 aa13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 FADS2P1A8MWK0 482 aa13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 POLR1CO15160 346 aaPredicted RBP13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 TMCC2O75069 709 aa13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 EOMESO95936 686 aa13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 FHP07954 510 aa13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 MSL3P1P0C860 447 aa13.38□□□□□ -0.27
SCNN1A-201ENST00000228916 ALAS2P22557 587 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms