RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CLIP4Q8N3C7 705 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 UGT2B28Q9BY64 529 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 MRPS26Q9BYN8 205 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 ZDHHC5Q9C0B5 715 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 ZCCHC2Q9C0B9 1178 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 GIN1Q9NXP7 522 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 KLHL3Q9UH77 587 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 FZD4Q9ULV1 537 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 RUVBL1Q9Y265 456 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 SLC27A6Q9Y2P4 619 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 A0A096LPI6 279 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 AQP9O43315 295 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 LILRB5O75023 590 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 HOXB3P14651 431 aaPredicted RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 PTPN6P29350 595 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 PTGS2P35354 604 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 KRT20P35900 424 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 PNLIPRP1P54315 467 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 TAS2R38P59533 333 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 TXNL4AP83876 142 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 CST6Q15828 149 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 DUOXA1Q1HG43 343 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 OLIG3Q7RTU3 272 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 ZC3H7AQ8IWR0 971 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 RIMKLAQ8IXN7 391 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 CSGALNACT1Q8TDX6 532 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 DUS3LQ96G46 650 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 LRIG1Q96JA1 1093 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 C12orf66Q96MD2 445 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 ANKRD60Q9BZ19 345 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 RIBC2Q9H4K1 309 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 RUBCNLQ9H714 662 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 FBXL12Q9NXK8 326 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 TSPAN11A1L157 253 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 SLC16A5O15375 505 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 PRKRAO75569 313 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 THRBP10828 461 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 AGXTP21549 392 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 CAPGP40121 348 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 CDK3Q00526 305 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 NDUFA5Q16718 116 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 PIP5KL1Q5T9C9 394 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 INTS11Q5TA45 600 aaKnown RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 GRHL2Q6ISB3 625 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 OR56A3Q8NH54 315 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 GOT1L1Q8NHS2 421 aaPredicted RBP9.54□□□□□ -0.88
USP11-201ENST00000218348 SPPL2AQ8TCT8 520 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 SLC5A11Q8WWX8 675 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 ZNF696Q9H7X3 374 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 POLR1BQ9H9Y6 1135 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 CDC14AQ9UNH5 594 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 SNX11Q9Y5W9 270 aa9.54□□□□□ -0.88
USP11-201ENST00000218348 H0Y8X5 98 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 UMPSP11172 480 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 HBA1P69905 142 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 DAG1Q14118 895 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 FGL2Q14314 439 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 PRSS53Q2L4Q9 553 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 SLC36A3Q495N2 470 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 PRAMEF14Q5SWL7 426 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 PRAMEF13Q5VWM6 474 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 PNCKQ6P2M8 343 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 CEP68Q76N32 757 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 LPCAT2Q7L5N7 544 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 BAG5Q9UL15 447 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 FRYLO94915 3013 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 PRSS23O95084 383 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 NPPAP01160 153 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 IL3P08700 152 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 C1GALT1C1LP0DN25 315 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 EPHA2P29317 976 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 SLC19A1P41440 591 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 NR4A2P43354 598 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 VLDLRP98155 873 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 LRRC74AQ0VAA2 488 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 MRPL28Q13084 256 aaKnown RBP9.53□□□□□ -0.88
USP11-201ENST00000218348 KCNAB2Q13303 367 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 GPR107Q5VW38 600 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 SPRED1Q7Z699 444 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 CPA6Q8N4T0 437 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 DOK4Q8TEW6 326 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 UBE2FQ969M7 185 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 OMA1Q96E52 524 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
USP11-201ENST00000218348 PLGRKTQ9HBL7 147 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 FANCFQ9NPI8 374 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 WASH6PQ9NQA3 447 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 MIEF1Q9NQG6 463 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 DCAF13Q9NV06 445 aaKnown RBP9.53□□□□□ -0.88
USP11-201ENST00000218348 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
USP11-201ENST00000218348 CNOT11Q9UKZ1 510 aaKnown RBP9.53□□□□□ -0.88
USP11-201ENST00000218348 CFAP54Q96N23 3096 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 TRBV5-3A0A0A0MS03 114 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 QSOX1O00391 747 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 SCAMP2O15127 329 aaKnown RBP9.53□□□□□ -0.88
USP11-201ENST00000218348 OR1F1O43749 312 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 KCNK5O95279 499 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 CAPNS1P04632 268 aa9.53□□□□□ -0.88
USP11-201ENST00000218348 CHI3L1P36222 383 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms