RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 GUCY1A3Q02108 690 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 DNASE1L3Q13609 305 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 COMMD6Q7Z4G1 85 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 AMER3Q8N944 861 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 OR1F2PQ96R84 312 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 TUBB1Q9H4B7 451 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 LRTM1Q9HBL6 345 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 LYRM4Q9HD34 91 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 C1orf109Q9NX04 203 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 MS4A12Q9NXJ0 267 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 PHF11Q9UIL8 331 aa19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 MRPS33Q9Y291 106 aaKnown RBP19.1■□□□□ 0.65
RHBDD3-201ENST00000216085 FREM2Q5SZK8 3169 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 TCP11X1B4DZS4 312 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 VPS4BO75351 444 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 JAK1P23458 1154 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 BSGP35613 385 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 XCR1P46094 333 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 MAT1AQ00266 395 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 BTKQ06187 659 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 TBL3Q12788 808 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CLN3Q13286 438 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 ATP6AP1LQ52LC2 224 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CCNYL2Q5T2Q4 361 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 FAM219BQ5XKK7 198 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 FAM47EQ6ZV65 393 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 C1orf52Q8N6N3 182 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 MIEF2Q96C03 454 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 NAF1Q96HR8 494 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 SLCO1B3Q9NPD5 702 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 TMED5Q9Y3A6 229 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 C1QTNF9BB2RNN3 333 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 NPIPB8E9PQR5 432 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CHST10O43529 356 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 TLX3O43711 291 aaPredicted RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 SEC22BO75396 215 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 B3GALT4O96024 378 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 KLK1P06870 262 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 C1QTNF9P0C862 333 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 OLR1P78380 273 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 SLAMF1Q13291 335 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 TGIF1Q15583 401 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 XKR7Q5GH72 579 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 MRPL14Q6P1L8 145 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 ZNF793Q6ZN11 406 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 LRRC69Q6ZNQ3 347 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 COX15Q7KZN9 410 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 ENDOVQ8N8Q3 282 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 OR5T3Q8NGG3 340 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CHTF18Q8WVB6 975 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 TUBGCP3Q96CW5 907 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 SORBS1Q9BX66 1292 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 NUF2Q9BZD4 464 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CCDC134Q9H6E4 229 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 AKIRIN1Q9H9L7 192 aaPredicted RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 SLC22A11Q9NSA0 550 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CTSFQ9UBX1 484 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 MCM8Q9UJA3 840 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 DAPP1Q9UN19 280 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 FARSAQ9Y285 508 aaKnown RBP19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 PTGDR2Q9Y5Y4 395 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 CHD8Q9HCK8 2581 aa19.09■□□□□ 0.65
RHBDD3-201ENST00000216085 ACACAQ13085 2346 aa19.08■□□□□ 0.65
RHBDD3-201ENST00000216085 IGLV3-12A0A075B6K2 115 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 LOC101059948A0A1B0GTJ6 334 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 GNG14A0A1W2PPG7 69 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 KLK10O43240 276 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 PCDH7O60245 1069 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 MAPK1P28482 360 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 TLX1P31314 330 aaPredicted RBP19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 BUD31P41223 144 aaPredicted RBP19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 FOLR3P41439 243 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 GSTM5P46439 218 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 MAPK12P53778 367 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 RAB38P57729 211 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 SNRPNP63162 240 aaKnown RBP19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 CA13Q8N1Q1 262 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 STT3BQ8TCJ2 826 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 ZCCHC14Q8WYQ9 949 aaKnown RBP19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 TBC1D20Q96BZ9 403 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 APIPQ96GX9 242 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 PEX11GQ96HA9 241 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 ZNF717Q9BY31 904 aaPredicted RBP19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 TGIF2Q9GZN2 237 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 WDR41Q9HAD4 459 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 APC2O95996 2303 aa19.08■□□□□ 0.64
RHBDD3-201ENST00000216085 SCN3AQ9NY46 2000 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 IGF2RP11717 2491 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 A0A0A6YYD5 115 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 BLACEA4D250 179 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 PTPN4P29074 926 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 TIA1P31483 386 aaKnown RBP eCLIP19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 LIM2P55344 173 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 MAD2L1Q13257 205 aaPredicted RBP19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 NKG7Q16617 165 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 SYT16Q17RD7 645 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 GALNTL6Q49A17 601 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 MFSD4BQ5TF39 518 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 LCN10Q6JVE6 187 aa19.07■□□□□ 0.64
RHBDD3-201ENST00000216085 EFCAB3Q8N7B9 438 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms