RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PXYLP1Q8TE99 480 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 PRAP1Q96NZ9 151 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 C8orf4Q9NR00 106 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 TMED5Q9Y3A6 229 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 SPTBN5Q9NRC6 3674 aaKnown RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 TRBV5-4A0A0C4DH59 114 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 HOXA2O43364 376 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 KIAA0513O60268 411 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 GABARAPO95166 117 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 MAP4K2Q12851 820 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 RSBN1Q5VWQ0 802 aaPredicted RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 CEACAM20Q6UY09 585 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 CYP4Z2PQ8N1L4 340 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 DYNC2LI1Q8TCX1 351 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 ZNF300Q96RE9 604 aaPredicted RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 DOHHQ9BU89 302 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 TRMT61BQ9BVS5 477 aaKnown RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 DUSP21Q9H596 190 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 TAC3Q9UHF0 121 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 PCDHGB3Q9Y5G1 929 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 TRBV4-1A0A0J9YWV2 114 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 A0A1W2PRB8 838 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 SLC22A1O15245 554 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 SNX4O95219 450 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 ZNF8P17098 575 aaPredicted RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 GPC1P35052 558 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 PIK3CBP42338 1070 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 MANFP55145 182 aaKnown RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 PTGES3Q15185 160 aaKnown RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 TMIGD1Q6UXZ0 262 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 SVOPQ8N4V2 548 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 FIBINQ8TAL6 211 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 KAT2AQ92830 837 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 NACC2Q96BF6 587 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 AKIP1Q9NQ31 210 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 YARS2Q9Y2Z4 477 aaKnown RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 DYRK1BQ9Y463 629 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 CST5P28325 142 aaPredicted RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 RYKP34925 604 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 SLC6A12P48065 614 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 SELENBP1Q13228 472 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 FXNQ16595 210 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 THOC7Q6I9Y2 204 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 MED27Q6P2C8 311 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 GRASPQ7Z6J2 395 aaPredicted RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 TSEN54Q7Z6J9 526 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 TCEANCQ8N8B7 351 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 SLC6A16Q9GZN6 736 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 SLIRPQ9GZT3 109 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 NDRG4Q9ULP0 352 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 M0R3H8 397 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 HOXD10P28358 340 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 RAB25P57735 213 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 ILF2Q12905 390 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 GCNT6Q5T4J0 391 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 LIPKQ5VXJ0 399 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 PLEKHG7Q6ZR37 379 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 TSPYL5Q86VY4 417 aaPredicted RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 MFSD4AQ8N468 514 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 C2orf15Q8WU43 125 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 COL26A1Q96A83 441 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 C7orf34Q96L11 122 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 MROQ9BYG7 248 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 WDR12Q9GZL7 423 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 CUEDC1Q9NWM3 386 aaPredicted RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 EXO1Q9UQ84 846 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 FNDC1Q4ZHG4 1894 aaPredicted RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 GBF1Q92538 1859 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 PLXND1Q9Y4D7 1925 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 GRM6O15303 877 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 TIMP2P16035 220 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 GPX2P18283 190 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 COPZ1P61923 177 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 ALDH6A1Q02252 535 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 IFI44LQ53G44 452 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 AMER3Q8N944 861 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 COL21A1Q96P44 957 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 DNMT3BQ9UBC3 853 aaKnown RBP14.43□□□□□ -0.1
EFNB1-201ENST00000204961 NOX1Q9Y5S8 564 aa14.43□□□□□ -0.1
EFNB1-201ENST00000204961 A0A1B0GVC2 190 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 A6NIN4 97 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 LOC110117498-PIK3R3F6TDL0 507 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 ATG13O75143 517 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 SOCS5O75159 536 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 FGF18O76093 207 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 ITGB8P26012 769 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 IRAK1BP1Q5VVH5 260 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 MMAAQ8IVH4 418 aaKnown RBP14.42□□□□□ -0.1
EFNB1-201ENST00000204961 OR9Q1Q8NGQ5 310 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 ATL1Q8WXF7 558 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 CEP295NLQ96MC4 621 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 TRPM6Q9BX84 2022 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 POP7O75817 140 aaKnown RBP14.42□□□□□ -0.1
EFNB1-201ENST00000204961 SELENOWP63302 87 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 IRF5Q13568 498 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 MPEG1Q2M385 716 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 TYW3Q6IPR3 259 aaKnown RBP14.42□□□□□ -0.1
EFNB1-201ENST00000204961 SERPINA11Q86U17 422 aa14.42□□□□□ -0.1
EFNB1-201ENST00000204961 TRIM48Q8IWZ4 208 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 210.5 ms