RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Adgrg1Q8K209 687 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Stk32cQ8QZV4 488 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nmd3Q99L48 503 aaKnown RBP15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fars2Q99M01 451 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mgme1Q9CXC3 338 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ap3m1Q9JKC8 418 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 A0A1L1STL9 112 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fmo6J3QMN6 532 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 PdxpP60487 292 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Polr2iP60898 125 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ebf1Q07802 591 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Abcb7Q61102 752 aaKnown RBP15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vat1Q62465 406 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sec24dQ6NXL1 1032 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Kcnk12Q76M80 430 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mettl20Q80ZM3 255 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Map4k5Q8BPM2 847 aaKnown RBP15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mmgt2Q8R3L0 123 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sh3glb2Q8R3V5 400 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Epsti1Q8VDI1 314 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nprl3Q8VIJ8 569 aa15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 HnrnpfQ9Z2X1 415 aaKnown RBP15.2■□□□□ 0.02
Trim39-203ENSMUST00000113706 R3hdmlA2A5I3 253 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 4930595M18RikA2RRY9 829 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pdia2D3Z6P0 527 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 1700011I03RikE9PYL8 271 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm10324L7N208 604 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cpa3P15089 417 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sox2P48432 319 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Hpcal1P62748 193 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Brinp2Q6DFY8 783 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fbxl4Q8BH70 621 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sall4Q8BX22 1067 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr77Q8VEY9 312 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr1278Q8VF39 313 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr986Q8VFN6 312 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm1110F6Y113 635 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm14139F6ZS36 494 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 1700122O11RikJ3QPW6 241 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ephb6O08644 1014 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ube2e3P52483 207 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tstd2Q3U269 495 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Q3USZ8 430 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sel1l2Q3V172 688 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rcbtb1Q6NXM2 531 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Bhlhb9Q6PB60 539 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Il23rQ8K4B4 644 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slc22a6Q8VC69 545 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Noxo1Q8VCM2 349 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Man2c1Q91W89 1039 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fam174aQ9D3L0 190 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Insm2Q9JMC2 493 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Snrnp200Q6P4T2 2136 aaKnown RBP15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tgm7A2ART8 616 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rhox6O70238 227 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nr5a2P45448 560 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fezf1Q0VDQ9 475 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cpxcr1Q3V0P1 322 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Magee2Q52KG3 523 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fut10Q5F2L2 481 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr594Q7TRR4 311 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Adamtsl2Q7TSK7 957 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Bbs4Q8C1Z7 520 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Irak2Q8CFA1 622 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gpr18Q8K1Z6 331 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pcdhga11Q91XY8 933 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 HnrnpabQ99020 285 aaKnown RBP15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mau2Q9D2X5 619 aaKnown RBP15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 MrrfQ9D6S7 262 aaKnown RBP15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 HgfacQ9R098 653 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 AgtrapQ9WVK0 161 aa15.19■□□□□ 0.02
Trim39-203ENSMUST00000113706 Klhl18A0A0G2JGN5 579 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm5141A0A0J9YUW3 581 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm33543A0A1B0GSI5 81 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 A0A1L1ST33 502 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rnf39A2RT81 352 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pole2O54956 527 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mtnd5P03921 607 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Stard6P59096 233 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Q3U7U4 132 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tyw1Q8BJM7 721 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 C1raQ8CG16 707 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sidt2Q8CIF6 832 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 CcsapQ8QZT2 252 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pex19Q8VCI5 299 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Chil4Q91Z98 402 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 AassQ99K67 926 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Exosc7Q9D0M0 291 aaKnown RBP15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tmeff2Q9QYM9 374 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Igkv17-127A0A0G2JDN5 117 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cytl1A1E5L0 139 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 1700023F06RikA2AB62 382 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Actl10A2AKE7 346 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 PpigA2AR02 752 aaKnown RBP15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 PdynO35417 248 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 PahP16331 453 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slc37a3Q3TIT8 494 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Grhl3Q5FWH3 603 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Osbp2Q5QNQ6 908 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Znf775Q8BI73 538 aa15.18■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms