RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Rad21l1A2AU37 552 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Skint11A7XV14 364 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 4930455H04RikD3Z622 58 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kctd17E0CYQ0 296 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vmn2r104E9Q2J5 860 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 5830473C10RikF8VQ07 620 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Asgr1P34927 284 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Aqp8P56404 261 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Abce1P61222 599 aaKnown RBP6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fbxo40P62932 710 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ranbp9P69566 653 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Scn1bP97952 218 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hbq1bQ3U0A6 142 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 E330014E10RikQ3UL33 481 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 D5Ertd577eQ499F0 481 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Adora2aQ60613 410 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 BckdhbQ6P3A8 390 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Carns1Q6ZPS2 827 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 DcstampQ7TNJ0 470 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr1065Q7TR70 313 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Clptm1lQ8BXA5 539 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cdhr5Q8VHF2 831 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ssr2Q9CPW5 183 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ndufs4Q9CXZ1 175 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 TcimQ9D915 106 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Amdhd1Q9DBA8 426 aa6.62□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Nup210Q9QY81 1886 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Wdr76A6PWY4 622 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Arhgap40E9Q6X9 672 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 1600015I10RikE9Q745 711 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm10477F6SW83 55 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm8444F6XS56 118 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fignl2J3QK54 644 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Atxn2O70305 1285 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kcnk4O88454 398 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hmx2P43687 273 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 HpcaP84075 193 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Arntl2Q2VPD4 579 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm14226Q3TZL0 686 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Rab26Q504M8 260 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Havcr1Q5QNS5 305 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 JrkQ60976 557 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Htr1aQ64264 421 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mfsd4aQ6PDC8 510 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc16a9Q7TM99 508 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Sel1l3Q80TS8 1137 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrps7Q80X85 242 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tmbim1Q8BJZ3 309 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Larp4Q8BWW4 719 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gpr152Q8BXS7 511 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 SinhcafQ8C8M1 221 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gfm1Q8K0D5 751 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Olfr659Q8VGV6 322 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Capn8Q91VA3 703 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Cela1Q91X79 266 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pcdhga12Q91XY7 932 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mat2bQ99LB6 334 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fis1Q9CQ92 152 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 D730048I06RikQ9CQB8 106 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tm9sf1Q9DBU0 606 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Mrps15Q9DC71 258 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tubb3Q9ERD7 450 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hs6st1Q9QYK5 411 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pdcd1lg2Q9WUL5 247 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Epb41l1Q9Z2H5 879 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Smok3cA0A087WSF2 504 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Xkr6E9Q6C8 638 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm17093F6XGJ4 214 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gh1P06880 216 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 ApoeP08226 311 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tbpl1P62340 186 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Hdac2P70288 488 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Tmem217Q14AF1 189 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Slc24a2Q14BI1 711 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 CamkvQ3UHL1 512 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Atf7ip2Q3UL97 452 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ankrd13bQ5F259 626 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 CishQ62225 257 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Kirrel2Q7TSU7 700 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Fam181bQ80VF6 417 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 PeloQ80X73 385 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Amigo1Q80ZD8 492 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm9758Q80ZT2 255 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 9130023H24RikQ8BG98 337 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Trim14Q8BVW3 440 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Casp9Q8C3Q9 454 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Vps37aQ8CHS8 397 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Snapc1Q8K0S9 389 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Dlgap5Q8K4R9 808 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Defb35Q8R2I3 63 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Klhdc8aQ91XA8 350 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Glra3Q91XP5 464 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Elovl6Q920L5 267 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Pwp1Q99LL5 501 aaKnown RBP6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Ppil1Q9D0W5 166 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Dennd6bQ9D9V7 585 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Lypd2Q9DD23 127 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 B4galt2Q9Z2Y2 369 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 Gm35315A0A1B0GRI2 571 aa6.61□□□□□ -1.35
Bdnf-201ENSMUST00000053317 AmacrO09174 381 aa6.61□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms