RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 4930563M21RikA0A1L1SUT5 578 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 1700017D01RikG5E851 209 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vmn2r12L7N217 831 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Elovl3O35949 271 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cdh11P55288 796 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 SmoP56726 793 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Kcna7Q17ST2 489 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Q3TTL0 348 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Paip1Q8VE62 400 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Zfp978A2A7I1 335 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ttll6A4Q9E8 822 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 OgdhlE9Q7L0 1029 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ackr2O08707 378 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc6a20bO88575 635 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Apoc3P33622 99 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rab5cP35278 216 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Matn1P51942 500 aaKnown RBP13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 PtnP63089 168 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Xrcc1Q60596 631 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc29a4Q8R139 528 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc6a20aQ8VDB9 592 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Itga10E9Q6R1 1167 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rbbp9O88851 186 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 TesP47226 423 aaKnown RBP13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Q3U7U4 132 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 HgsnatQ3UDW8 656 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 FcrlbQ5DRQ8 427 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Acad8Q9D7B6 413 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 PolhQ9JJN0 694 aa13.53□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm13102A2ASJ3 519 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pecam1Q08481 727 aaKnown RBP13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tas2r110Q7M712 333 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc17a6Q8BLE7 582 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Phf11cB4XVP9 339 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr1221L7MU53 311 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vmn2r52L7N2B2 852 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Man2a1P27046 1150 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm527Q4KL13 310 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 CtbsQ8R242 366 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tmprss11dQ8VHK8 417 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nt5c1bQ91YE9 573 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Polr2hQ923G2 150 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pno1Q9CPS7 248 aaKnown RBP13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pramef25A2ASI9 494 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr519K7N645 319 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tcte3P11985 191 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gtf2a2Q80ZM7 109 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Dnajb2Q9QYI5 324 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Unc13bQ9Z1N9 1602 aa13.52□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr1056A2AVY0 313 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 SmgcF6VRN1 385 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gm8444F6XS56 118 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Tspan6O70401 245 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 HexbP20060 536 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Meaf6Q2VPQ9 191 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Eef2kmtQ3UZW7 335 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr692Q8VF03 329 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 GabreA2AMW3 916 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr456B2RT27 312 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr557E9Q550 322 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Il17reQ8BH06 637 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Prox2Q8BII1 593 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Rdh12Q8BYK4 316 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Vmn1r229Q8R2A9 306 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr458Q8VF80 313 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr457Q8VGP5 313 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Dok4Q99KE3 325 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Vmn2r24D3YUI0 854 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gm9008E9PVG0 424 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 FapP97321 761 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 CbfbQ08024 187 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Zfp235Q499D5 702 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Nxf3Q4ZGD9 553 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Nlrc3Q5DU56 1064 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Eci3Q78JN3 317 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Blzf1Q8R2X8 403 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Pmepa1Q9D7R2 260 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Mia3Q8BI84 1930 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Cd44P15379 778 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Esr1P19785 599 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Slc45a4Q0P5V9 785 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Yy2Q3TTC2 378 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Tmem199Q5SYH2 208 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 AntxrlQ8BVM2 641 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Cd209eQ91ZW7 208 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Zfp64Q99KE8 643 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gid4Q9CPY6 217 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gnpda2Q9CRC9 276 aa13.52□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Ltb4rO88855 351 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 PrnpP04925 254 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Mmp3P28862 477 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Olfr305Q7TS02 319 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Scara5Q8K299 491 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Fbxo36Q9CQ24 188 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Bcl2l11O54918 196 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Galr2O88854 371 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Arl14Q3SXC5 192 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Gfod1Q3UHD2 390 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 1810065E05RikQ5NC41 235 aa13.51□□□□□ -0.25
Col5a1-201ENSMUST00000028280 Creg2Q8BGC9 288 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 131.3 ms