RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RPS13P62277 151 aaKnown RBP17.68■□□□□ 0.42
PNKP-224ENST00000631020 IFT88Q13099 833 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 ABRAXAS2Q15018 415 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 FAM214AQ32MH5 1076 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 ADPRMQ3LIE5 342 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 SH2D4BQ5SQS7 431 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 KANK2Q63ZY3 851 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 ATG16L1Q676U5 607 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 SCIMPQ6UWF3 145 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 TRIM42Q8IWZ5 723 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 ARFGAP2Q8N6H7 521 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 ZNF781Q8N8C0 355 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 TTC29Q8NA56 475 aaPredicted RBP17.68■□□□□ 0.42
PNKP-224ENST00000631020 DYDC1Q8WWB3 177 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 F2RL3Q96RI0 385 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 NDC1Q9BTX1 674 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 OR51B5Q9H339 312 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 ELOVL6Q9H5J4 265 aa17.68■□□□□ 0.42
PNKP-224ENST00000631020 SUV39H1O43463 412 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 FOXS1O43638 330 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 ULK1O75385 1050 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 B3GALT4O96024 378 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 KRT6AP02538 564 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 KRT6BP04259 564 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 KLK3P07288 261 aaPredicted RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 SMIM10L1P0DMW3 83 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 SERPINB1P30740 379 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 KRT6CP48668 564 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 RGS1Q08116 209 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 DEFB109BQ30KR1 87 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 TOR1AIP1Q5JTV8 583 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 GARNL3Q5VVW2 1013 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 RHBDD2Q6NTF9 364 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 TTLL10Q6ZVT0 673 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 PRSS41Q7RTY9 318 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 UBE3DQ7Z6J8 389 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 CLYBLQ8N0X4 340 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 ZCCHC10Q8TBK6 192 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 UTP15Q8TED0 518 aaKnown RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 SELENOMQ8WWX9 145 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 MS4A6EQ96DS6 147 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 CMTM7Q96FZ5 175 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 SMIM10Q96HG1 83 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 NLNQ9BYT8 704 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 TUBB1Q9H4B7 451 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 AKIRIN1Q9H9L7 192 aaPredicted RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 THAP1Q9NVV9 213 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 HAO1Q9UJM8 370 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 FIS1Q9Y3D6 152 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 RAP2CQ9Y3L5 183 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 DNAJC15Q9Y5T4 150 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 KCNMB2Q9Y691 235 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 CRCPO75575 148 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 ZNF888P0CJ79 500 aaPredicted RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 ALAS2P22557 587 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 PTPN4P29074 926 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 RORAP35398 523 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 ARSFP54793 590 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 RPS15P62841 145 aaKnown RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 OCRLQ01968 901 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 MUM1Q2TAK8 710 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 DEPDC1Q5TB30 811 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 C1orf189Q5VU69 101 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 AFAP1L2Q8N4X5 818 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 CLIP3Q96DZ5 547 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 DPH2Q9BQC3 489 aaPredicted RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 REXO4Q9GZR2 422 aaKnown RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 ILKAPQ9H0C8 392 aaPredicted RBP17.67■□□□□ 0.42
PNKP-224ENST00000631020 ACTL8Q9H568 366 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 SRPK3Q9UPE1 567 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 SLC22A7Q9Y694 548 aa17.67■□□□□ 0.42
PNKP-224ENST00000631020 SAP18O00422 153 aaKnown RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 DSCR3O14972 297 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 ITGAXP20702 1163 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 PTX3P26022 381 aaPredicted RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 RAB8AP61006 207 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 FAM53BQ14153 422 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 ERV3-1Q14264 604 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 C10orf62Q5T681 223 aaPredicted RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 ATP1A1-AS1Q5TC04 95 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 YOD1Q5VVQ6 348 aaPredicted RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 KHDRBS2Q5VWX1 349 aaKnown RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 ZNF385CQ66K41 422 aaPredicted RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 LCN10Q6JVE6 187 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 PRICKLE2Q7Z3G6 844 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 PDSS2Q86YH6 399 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 DSELQ8IZU8 1212 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 C9orf43Q8TAL5 461 aaPredicted RBP17.66■□□□□ 0.42
PNKP-224ENST00000631020 LRRC8CQ8TDW0 803 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 MAGEB18Q96M61 343 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 GBP5Q96PP8 586 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 SLCO1B3Q9NPD5 702 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 PNPOQ9NVS9 261 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 PPT2Q9UMR5 302 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 PTGDR2Q9Y5Y4 395 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 SCN3AQ9NY46 2000 aa17.66■□□□□ 0.42
PNKP-224ENST00000631020 FER1L5A0AVI2 2057 aa17.65■□□□□ 0.42
PNKP-224ENST00000631020 A0A0A6YYC8 382 aaPredicted RBP17.65■□□□□ 0.42
PNKP-224ENST00000631020 A0A1B0GX78 115 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms