RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 KBTBD2Q8IY47 623 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 MFSD4AQ8N468 514 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 RDH11Q8TC12 318 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 PPP4R1Q8TF05 950 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 MVB12AQ96EY5 273 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 CLPTM1LQ96KA5 538 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 PPM1MQ96MI6 270 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 RILPQ96NA2 401 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 FCRL5Q96RD9 977 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 MAP3K3Q99759 626 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 TDRD1Q9BXT4 1180 aaKnown RBP4.65□□□□□ -1.67
LINC00550-201ENST00000629293 RHOJQ9H4E5 214 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF385DQ9H6B1 395 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 CAB39LQ9H9S4 337 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 MRM3Q9HC36 420 aaKnown RBP4.65□□□□□ -1.67
LINC00550-201ENST00000629293 PDE7BQ9NP56 450 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 LHX9Q9NQ69 397 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 SEMA3GQ9NS98 782 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 FGF21Q9NSA1 209 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 NSMCE4AQ9NXX6 385 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.65□□□□□ -1.67
LINC00550-201ENST00000629293 SNX7Q9UNH6 387 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 LRP4O75096 1905 aa4.65□□□□□ -1.67
LINC00550-201ENST00000629293 IGHV5-51A0A0C4DH38 117 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 LDB2O43679 373 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 NUAK1O60285 661 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 APOA4P06727 396 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 EBLN1P0CF75 366 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CCNCP24863 283 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 GABRB3P28472 473 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 PIK3CBP42338 1070 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 HK2P52789 917 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ALDH6A1Q02252 535 aaKnown RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 TRIM25Q14258 630 aaKnown RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 PTCHD3Q3KNS1 767 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ARMC3Q5W041 872 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 PDPK2PQ6A1A2 396 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 LINC00523Q86TU6 105 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 KIRREL3Q8IZU9 778 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF781Q8N8C0 355 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ACTRT2Q8TDY3 377 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 SCARF2Q96GP6 870 aaPredicted RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ZDHHC12Q96GR4 267 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CRB3Q9BUF7 120 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 B3GNT4Q9C0J1 378 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CHRAC1Q9NRG0 131 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 IRAK4Q9NWZ3 460 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF624Q9P2J8 865 aaPredicted RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CNOT6Q9ULM6 557 aaKnown RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 LRCH1Q9Y2L9 728 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CELSR1Q9NYQ6 3014 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 APCP25054 2843 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 OR5K4A6NMS3 321 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ANKRD66B4E2M5 251 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ZBTB14O43829 449 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 PYGLP06737 847 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CLEC2LP0C7M8 214 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 SLC35E2BP0CK96 405 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ANPEPP15144 967 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 AKT1P31749 480 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CLCNKAP51800 687 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 PRKAA2P54646 552 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 SLC9A5Q14940 896 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 INPP5JQ15735 1006 aaPredicted RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 VWA5B1Q5TIE3 1220 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 METTL21CQ5VZV1 264 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ARMC6Q6NXE6 501 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 DUS1LQ6P1R4 473 aaKnown RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 LRRTM4Q86VH4 590 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CENPLQ8N0S6 344 aaPredicted RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 SLC25A41Q8N5S1 370 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 OR2C3Q8N628 320 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 DNAAF3Q8N9W5 541 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 GPR26Q8NDV2 337 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 STYXQ8WUJ0 223 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 STMN2Q93045 179 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 C19orf60Q96EN9 201 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 COX14Q96I36 57 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CNDP1Q96KN2 507 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 GPR78Q96P69 363 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 TBL1YQ9BQ87 522 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 APOL2Q9BQE5 337 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 THTPAQ9BU02 230 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 GATA5Q9BWX5 397 aaPredicted RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 SPRY4Q9C004 299 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 CHST8Q9H2A9 424 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 NMRAL1Q9HBL8 299 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 DMRT3Q9NQL9 472 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 IARS2Q9NSE4 1012 aaKnown RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 TREX1Q9NSU2 369 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 C20orf96Q9NUD7 363 aaPredicted RBP4.64□□□□□ -1.67
LINC00550-201ENST00000629293 PDP2Q9P2J9 529 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 MID2Q9UJV3 735 aa4.64□□□□□ -1.67
LINC00550-201ENST00000629293 ABCA2Q9BZC7 2435 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 LILRA5A6NI73 299 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 MATN2O00339 956 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 TRIM13O60858 407 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 SCRG1O75711 98 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 CIB2O75838 187 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 PRLP01236 227 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms