RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 KIF2BQ8N4N8 673 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 DPP10Q8N608 796 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 DNAJB8Q8NHS0 232 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SLC45A3Q96JT2 553 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 TEFMQ96QE5 360 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 HOPXQ9BPY8 73 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 MACROD1Q9BQ69 325 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 CADM1Q9BY67 442 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 REEP4Q9H6H4 257 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 MAP10Q9P2G4 905 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 PLCL2Q9UPR0 1127 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 WDFY4Q6ZS81 3184 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 KLHL18O94889 574 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 LRATO95237 230 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 CPNE6O95741 557 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SMIM10L1P0DMW3 83 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 COX7A2P14406 83 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 NQO1P15559 274 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 DDX5P17844 614 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ATP5A1P25705 553 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 DGKQP52824 942 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 HSD11B2P80365 405 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 DAB2P98082 770 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 CFHR1Q03591 330 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 FOXM1Q08050 763 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 LRRC74AQ0VAA2 488 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 UGT8Q16880 541 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 FAM71E1Q6IPT2 247 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 TLDC1Q6P9B6 456 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 DEFB107AQ8IZN7 70 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 CSNK1A1LQ8N752 337 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 KCT2Q8NC54 265 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 UTP15Q8TED0 518 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 OR52E6Q96RD3 313 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SORBS1Q9BX66 1292 aaKnown RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 COPS7BQ9H9Q2 264 aaPredicted RBP13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 WDR41Q9HAD4 459 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ATAD3AQ9NVI7 634 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SOHLH2Q9NX45 425 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ATP6V1HQ9UI12 483 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 SLC22A7Q9Y694 548 aa13.53□□□□□ -0.24
CLTCL1-212ENST00000622493 ASPDHA6ND91 283 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 P2RX6O15547 441 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 AKAP10O43572 662 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 EIF2S1P05198 315 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 CSF2RBP32927 897 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 MTTPP55157 894 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 VSX2P58304 361 aaPredicted RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 KCNJ2P63252 427 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 C2orf80Q0P641 193 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 PDE7AQ13946 482 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 TCTE1Q5JU00 501 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 PERM1Q5SV97 790 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 CPTPQ5TA50 214 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 MRM1Q6IN84 353 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 TMEM214Q6NUQ4 689 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF793Q6ZN11 406 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 USP53Q70EK8 1073 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 NATD1Q8N6N6 113 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 ACOT4Q8N9L9 421 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 CDC26Q8NHZ8 85 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 TM4SF18Q96CE8 201 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 COQ8BQ96D53 544 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF764Q96H86 408 aaPredicted RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 RSRC1Q96IZ7 334 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF285Q96NJ3 590 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 LRRN3Q9H3W5 708 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 BATF3Q9NR55 127 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 ENAMQ9NRM1 1142 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 FAM120CQ9NX05 1096 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 CROTQ9UKG9 612 aa13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 PRPF19Q9UMS4 504 aaKnown RBP13.52□□□□□ -0.25
CLTCL1-212ENST00000622493 RALGAPA1Q6GYQ0 2036 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 VPS13AQ96RL7 3174 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 GABRR3A8MPY1 467 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 TMPRSS11DO60235 418 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 SH3BP5O60239 455 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 TBX19O60806 448 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 STATHP02808 62 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 FURINP09958 794 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 FAM58BPP0C7Q3 252 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 MSL3P1P0C860 447 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 DRD2P14416 443 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 DDCP20711 480 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 PGM1P36871 562 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 GABRA4P48169 554 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 ARL4DP49703 201 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 RAB8AP61006 207 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 KLC1Q07866 573 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 TCF15Q12870 199 aa13.51□□□□□ -0.25
CLTCL1-212ENST00000622493 NFYCQ13952 458 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms