RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 TRIM23P36406 574 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 CDKN2CP42773 168 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 INTS11Q5TA45 600 aaKnown RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 MMP21Q8N119 569 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 FAM47BQ8NA70 645 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 OTULINQ96BN8 352 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 MYCBPQ99417 103 aaPredicted RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 LTB4R2Q9NPC1 389 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 RPS6KA6Q9UK32 745 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 PPM1DO15297 605 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 LAMTOR5O43504 91 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 B3GALT2O43825 422 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 PRKRAO75569 313 aaKnown RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 CREG1O75629 220 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 CHRM5P08912 532 aaPredicted RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 FOXM1Q08050 763 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ARHGAP19Q14CB8 494 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 GALNT5Q7Z7M9 940 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 PROX1Q92786 737 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ACTL8Q9H568 366 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 REEP1Q9H902 201 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ZNF556Q9HAH1 456 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ACTR10Q9NZ32 417 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 AP3M1Q9Y2T2 418 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 ANHXE9PGG2 379 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ZSCAN9O15535 394 aaPredicted RBP15.02■□□□□ -0
CPSF1-213ENST00000620219 CERS1P27544 350 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ARRB1P49407 418 aaPredicted RBP15.02■□□□□ -0
CPSF1-213ENST00000620219 VASPP50552 380 aaPredicted RBP15.02■□□□□ -0
CPSF1-213ENST00000620219 GGTA1PQ4G0N0 100 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 WDR45BQ5MNZ6 344 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ADHFE1Q8IWW8 467 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 GPR135Q8IZ08 494 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 COX14Q96I36 57 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 GRIP2Q9C0E4 1043 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ENO4A6NNW6 628 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 CASQ2O14958 399 aaPredicted RBP15.02■□□□□ -0
CPSF1-213ENST00000620219 PPIBP23284 216 aaKnown RBP15.02■□□□□ -0
CPSF1-213ENST00000620219 ACADLP28330 430 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 STX4Q12846 297 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 BLMHQ13867 455 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ASPGQ86U10 573 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 DHRSXQ8N5I4 330 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 SLC37A2Q8TED4 501 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 CLMPQ9H6B4 373 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ANGPT4Q9Y264 503 aa15.02■□□□□ -0
CPSF1-213ENST00000620219 ZFC3H1O60293 1989 aaKnown RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 SOX1O00570 391 aaPredicted RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 FUCA1P04066 466 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 GPIP06744 558 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 FAM58BPP0C7Q3 252 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 ETFAP13804 333 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 ANXA11P50995 505 aaKnown RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 SIM1P81133 766 aaPredicted RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 LASP1Q14847 261 aaKnown RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 CEACAM20Q6UY09 585 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 SFTPA2Q8IWL1 248 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 LINC00615Q96LM1 132 aaPredicted RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 IKZF5Q9H5V7 419 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 SLC24A3Q9HC58 644 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 CACNA1IQ9P0X4 2223 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 A0A096LPI6 279 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 AQP12BA6NM10 295 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 HAT1O14929 419 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 NOBOXO60393 691 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 NOL3O60936 208 aaKnown RBP15.02□□□□□ -0.01
CPSF1-213ENST00000620219 SCELO95171 688 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 YPEL5P62699 121 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 SLC13A2Q13183 592 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 TLR1Q15399 786 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 DEF8Q6ZN54 512 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 DGLUCYQ7Z3D6 616 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 AQP12AQ8IXF9 295 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 CAMKVQ8NCB2 501 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 BRF2Q9HAW0 419 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 MUTYHQ9UIF7 546 aa15.02□□□□□ -0.01
CPSF1-213ENST00000620219 M0QX08 132 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 B4GALT2O60909 372 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 OR4C11Q6IEV9 310 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TLDC1Q6P9B6 456 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 ENPP6Q6UWR7 440 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 OR2L3Q8NG85 312 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 NFKBIDQ8NI38 313 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TRIM45Q9H8W5 580 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 C2orf42Q9NWW7 574 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 CORO2BQ9UQ03 480 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 SLC17A4Q9Y2C5 497 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 MAGED1Q9Y5V3 778 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 LCMT2O60294 686 aaKnown RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 PRAMEF10O60809 474 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 KCNJ13O60928 360 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 PRKACGP22612 351 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 TRPC1P48995 793 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 CHN2P52757 468 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 HNRNPKP61978 463 aaKnown RBP eCLIP15.01□□□□□ -0.017e-7■■■■□ 25.3
CPSF1-213ENST00000620219 PRKCQQ04759 706 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 SUZ12Q15022 739 aaKnown RBP15.01□□□□□ -0.01
CPSF1-213ENST00000620219 UGT8Q16880 541 aa15.01□□□□□ -0.01
CPSF1-213ENST00000620219 NDUFAF5Q5TEU4 345 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms