RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FOXD2O60548 495 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 TBX6O95947 436 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 IGFBP5P24593 272 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 ALDH3B2P48448 385 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 CTBSQ01459 385 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 HSPB3Q12988 150 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 CLCA4Q14CN2 919 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 MLF2Q15773 248 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 CTU2Q2VPK5 515 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 ANKRD54Q6NXT1 300 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 TNFAIP8L2Q6P589 184 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 UNC5DQ6UXZ4 953 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 NUDT18Q6ZVK8 323 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 OTUB1Q96FW1 271 aaPredicted RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 MAGED4Q96JG8 741 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 TRIT1Q9H3H1 467 aaKnown RBP11.87□□□□□ -0.51
CIITA-212ENST00000618207 TRPV4Q9HBA0 871 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 C3orf18Q9UK00 162 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 ORC6Q9Y5N6 252 aa11.87□□□□□ -0.51
CIITA-212ENST00000618207 FOXE1O00358 373 aaPredicted RBP11.86□□□□□ -0.51
CIITA-212ENST00000618207 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 C7P10643 843 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 ALPPL2P10696 532 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 MAPK12P53778 367 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 ZNF33BQ06732 778 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 CD47Q08722 323 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
CIITA-212ENST00000618207 LSAMPQ13449 338 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 RAPSNQ13702 412 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 TMEM196Q5HYL7 178 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 MSANTD1Q6ZTZ1 278 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 FAM129CQ86XR2 697 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 METTL4Q8N3J2 472 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 STARD8Q92502 1023 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 NPLQ9BXD5 320 aaPredicted RBP11.86□□□□□ -0.51
CIITA-212ENST00000618207 SLC17A9Q9BYT1 436 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 C8orf4Q9NR00 106 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
CIITA-212ENST00000618207 OBP2AQ9NY56 170 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 TMEFF2Q9UIK5 374 aaPredicted RBP11.86□□□□□ -0.51
CIITA-212ENST00000618207 MSRAQ9UJ68 235 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 RPS6KA6Q9UK32 745 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 SH3GLB1Q9Y371 365 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 POM121BA6NF01 834 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 H0YAE9 185 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 M0QX08 132 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 SUV39H1O43463 412 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 DNTTP04053 509 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 C5AR1P21730 350 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 DAPP51397 102 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 ARHGDIAP52565 204 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 PPP2CBP62714 309 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 PPP2CAP67775 309 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 TFF2Q03403 129 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 RAB39AQ14964 217 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 TTC23Q5W5X9 447 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 GALNT18Q6P9A2 607 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 LCTLQ6UWM7 567 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 SLC9B2Q86UD5 537 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 PARP8Q8N3A8 854 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 SVOPLQ8N434 492 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 C11orf65Q8NCR3 313 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 NCSTNQ92542 709 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 UBE2FQ969M7 185 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 AIF1LQ9BQI0 150 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 DGCR6LQ9BY27 220 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 MAGIXQ9H6Y5 334 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 CXorf21Q9HAI6 301 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 ATAD3AQ9NVI7 634 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 ZNF282Q9UDV7 671 aaPredicted RBP11.86□□□□□ -0.51
CIITA-212ENST00000618207 BTNL2Q9UIR0 455 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 TICRRQ7Z2Z1 1910 aa11.86□□□□□ -0.51
CIITA-212ENST00000618207 RNASET2O00584 256 aaKnown RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 GCM2O75603 506 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 TRMUO75648 421 aaKnown RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 COL9A1P20849 921 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 FUT4P22083 530 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 PTX3P26022 381 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 FMO3P31513 532 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 KIR2DL1P43626 348 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 DGKEP52429 567 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 PHEXP78562 749 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 ZNF776Q68DI1 518 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 FAM71E1Q6IPT2 247 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 CBLL1Q75N03 491 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 EIF3MQ7L2H7 374 aaKnown RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 HMGN2P46Q86SG4 172 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
CIITA-212ENST00000618207 KLHDC8AQ8IYD2 350 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 ADGRF3Q8IZF5 1079 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 FLCNQ8NFG4 579 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.85□□□□□ -0.51
CIITA-212ENST00000618207 RAB8BQ92930 207 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 C17orf62Q9BQA9 187 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 FANCEQ9HB96 536 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms