RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	IFNA14	P01570	189 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CNR2	P34972	360 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SOX3	P41225	446 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	OR1E2	P47887	323 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	MVD	P53602	400 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	P2RX3	P56373	397 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	IRF8	Q02556	426 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SCARB2	Q14108	478 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SPHAR	Q15513	63 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TAB1	Q15750	504 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130		Q5BKY6	102 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CLLU1OS	Q5K130	101 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TMEM201	Q5SNT2	666 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SIGIRR	Q6IA17	410 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	FRMPD2B	Q6IN97	320 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TRAF7	Q6Q0C0	670 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	KLHL17	Q6TDP4	642 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	FAM131A	Q6UXB0	335 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	FAM92B	Q6ZTR7	304 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CCDC149	Q6ZUS6	474 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	LAS2	Q8IYD9	372 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	RNF175	Q8N4F7	328 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CLDN22	Q8N7P3	220 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	AQP11	Q8NBQ7	271 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	OR4A15	Q8NGL6	344 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	OR9Q1	Q8NGQ5	310 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	KLHL6	Q8WZ60	621 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	GTPBP3	Q969Y2	492 aa	Known RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SLC25A46	Q96AG3	418 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	MSLNL	Q96KJ4	702 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	FYTTD1	Q96QD9	318 aa	Known RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	VPS35	Q96QK1	796 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TCF25	Q9BQ70	676 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	IRF2BPL	Q9H1B7	796 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TMEM38A	Q9H6F2	299 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TIGAR	Q9NQ88	270 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	ACER3	Q9NUN7	267 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	VWA8	A3KMH1	1905 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SOCS5	O75159	536 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CS	O75390	466 aa	Known RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	GADD45G	O95257	159 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	GJB5	O95377	273 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CRYZL1	O95825	349 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	EOMES	O95936	686 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	IL1A	P01583	271 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	ITPKA	P23677	461 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	HNF1B	P35680	557 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	CRAT	P43155	626 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	BCL2L1	Q07817	233 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	MLLT11	Q13015	90 aa	Predicted RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	PLCZ1	Q86YW0	608 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	OR52N2	Q8NGI0	321 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	C2orf15	Q8WU43	125 aa	Known RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	OVCA2	Q8WZ82	227 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	TMEM80	Q96HE8	168 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	MCOLN1	Q9GZU1	580 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	BRF2	Q9HAW0	419 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	DIABLO	Q9NR28	239 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	NDOR1	Q9UHB4	597 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	GABRQ	Q9UN88	632 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	SSR3	Q9UNL2	185 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	DSPP	Q9NZW4	1301 aa		13.18	□□□□□ -0.3
UBE2F-223	ENST00000612130	PCNT	O95613	3336 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	FADS2P1	A8MWK0	482 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	PCDH17	O14917	1159 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	TPST2	O60704	377 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	CYP17A1	P05093	508 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	CSF3	P09919	207 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	OR56A5	P0C7T3	313 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	CD22	P20273	847 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	IDS	P22304	550 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	MAPK8	P45983	427 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	KCNC3	Q14003	757 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	NCF4	Q15080	339 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	QPRT	Q15274	297 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	CRB2	Q5IJ48	1285 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	HECTD3	Q5T447	861 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	OXR1	Q8N573	874 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	NLGN2	Q8NFZ4	835 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	REPS1	Q96D71	796 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	NIPAL2	Q9H841	368 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	ENPP4	Q9Y6X5	453 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	FRMPD3	Q5JV73	1810 aa		13.17	□□□□□ -0.3
UBE2F-223	ENST00000612130	IGLV3-16	A0A075B6K0	115 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130		A0A0B4J293	547 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	UPK3BL1	B0FP48	263 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	UPK3BL2	E5RIL1	263 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	GFY	I3L273	518 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	TLR4	O00206	839 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	COCH	O43405	550 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	ENTPD6	O75354	484 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	ADA	P00813	363 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	SRPRA	P08240	638 aa	Known RBP	13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	ETFA	P13804	333 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	POU2F1	P14859	743 aa		13.16	□□□□□ -0.3
UBE2F-223	ENST00000612130	RHCE	P18577	417 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms