RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 DNASE1L2Q92874 299 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CASD1Q96PB1 797 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TBX5Q99593 518 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CLSTN3Q9BQT9 956 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM175Q9BSA9 504 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 FAIM2Q9BWQ8 316 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 KLF16Q9BXK1 252 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TMEM121BQ9BXQ6 578 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 ACTL8Q9H568 366 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 MARCH5Q9NX47 278 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 TAS2R9Q9NYW1 312 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 PPT2Q9UMR5 302 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 GPSM3Q9Y4H4 160 aa6.6□□□□□ -1.35
SYNPO2-206ENST00000610556 CLCA1A8K7I4 914 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 TTC34A8MYJ7 566 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 DLGAP1O14490 977 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 AP3D1O14617 1153 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC30A4O14863 429 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SCAMP2O15127 329 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 TEX28O15482 410 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SOD2P04179 222 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ACPPP15309 386 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CR2P20023 1033 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CD40LGP29965 261 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 AVPR1BP47901 424 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CLK3P49761 638 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 TIAL1Q01085 375 aaKnown RBP eCLIP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CAP1Q01518 475 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 COX10Q12887 443 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SGCGQ13326 291 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 FBXO43Q4G163 708 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 BRAT1Q6PJG6 821 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 COMMD6Q7Z4G1 85 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ZFP41Q8N8Y5 198 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 DTX3Q8N9I9 347 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 USP7Q93009 1102 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 FCRL4Q96PJ5 515 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ZSCAN5AQ9BUG6 496 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 VNN3Q9NY84 501 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 STMN3Q9NZ72 180 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SPATA7Q9P0W8 599 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CLEC4EQ9ULY5 219 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PRR23D1E9PI22 279 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 H7BY64 318 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CCRL2O00421 344 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CTDSP2O14595 271 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PCDHGA12O60330 932 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 MPZL2O60487 215 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PRR23D2P0DMB1 279 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 LAG3P18627 525 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PTX3P26022 381 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PDHA2P29803 388 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CTSCP53634 463 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PHC1P78364 1004 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CTBSQ01459 385 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CD300CQ08708 224 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 NOGQ13253 232 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 LEXMQ3ZCV2 418 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 DESI1Q6ICB0 168 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF544Q6NX49 715 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 MZT2BQ6NZ67 158 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ELMSAN1Q6PJG2 1045 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF783Q6ZMS7 281 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF517Q6ZMY9 492 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 LUZP2Q86TE4 346 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 GHDCQ8N2G8 530 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 IQCF1Q8N6M8 205 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 OR8D1Q8WZ84 308 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 GLYATL1Q969I3 302 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 NEIL2Q969S2 332 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 TMCO6Q96DC7 493 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CCDC115Q96NT0 180 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PRAP1Q96NZ9 151 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SPRTNQ9H040 489 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 P2RY12Q9H244 342 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 LINC00597Q9H2U6 94 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 RNF167Q9H6Y7 350 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 NKIRAS2Q9NYR9 191 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 IL37Q9NZH6 218 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PCDH10Q9P2E7 1040 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 STOX2Q9P2F5 926 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CDH7Q9ULB5 785 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 RPL36Q9Y3U8 105 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 TRIP12Q14669 1992 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PRMT3O60678 531 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 KCNK5O95279 499 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CPNE6O95741 557 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 EPHX1P07099 455 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 GSTT2P0CG29 244 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 GSTT2BP0CG30 244 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 PSKH1P11801 424 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 CTNNB1P35222 781 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 SOX3P41225 446 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 MAGEA8P43361 318 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 DGKGP49619 791 aa6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 RGS8P57771 180 aaPredicted RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 LASP1Q14847 261 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-206ENST00000610556 TEAD2Q15562 447 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms