RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 TUBA4AP68366 448 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ERV3-1Q14264 604 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 TMEM184AQ6ZMB5 413 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 NRSN1Q8IZ57 195 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 RPLP0P6Q8NHW5 317 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 HMGCLL1Q8TB92 370 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 HM13Q8TCT9 377 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 PROKR1Q8TCW9 393 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF382Q96SR6 550 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 C19orf43Q9BQ61 176 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SPNS1Q9H2V7 528 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 PCDHGA3Q9Y5H0 932 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 PSMD11O00231 422 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 BCAS2O75934 225 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 AP2A2O94973 939 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 KCNH1O95259 989 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF182P17025 639 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ELK4P28324 431 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 MLLT3P42568 568 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SSR2P43308 183 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 RPS14P62263 151 aaKnown RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 PIGGQ5H8A4 983 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF776Q68DI1 518 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 DEF8Q6ZN54 512 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 LARP4Q71RC2 724 aaKnown RBP eCLIP9.43□□□□□ -0.91e-7■■□□□ 12.6
CTCFL-222ENST00000609232 HORMAD1Q86X24 394 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 C10orf111Q8N326 155 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 PDPRQ8NCN5 879 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 TNIP2Q8NFZ5 429 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 HUS1BQ8NHY5 278 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 WDR48Q8TAF3 677 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 HCAR2Q8TDS4 363 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SLC13A3Q8WWT9 602 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ACPTQ9BZG2 426 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 S1PR5Q9H228 398 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 PTBP2Q9UKA9 531 aaKnown RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 NOX1Q9Y5S8 564 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 C2orf16Q68DN1 1984 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 XPNPEP2O43895 674 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ALBP02768 609 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 CTSEP14091 401 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SLC6A2P23975 617 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 NTSR1P30989 418 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 KIR3DL1P43629 444 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 BMXP51813 675 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 MANFP55145 182 aaKnown RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 UGT3A2Q3SY77 523 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 FRG2Q64ET8 278 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 FAM83HQ6ZRV2 1179 aaPredicted RBP9.43□□□□□ -0.9
CTCFL-222ENST00000609232 TICAM1Q8IUC6 712 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 P3H2Q8IVL5 708 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 KIAA2013Q8IYS2 634 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ZFPM2Q8WW38 1151 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SLC9A6Q92581 669 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 ART5Q96L15 291 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 FRG2BQ96QU4 278 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 NEURL2Q9BR09 285 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 GPR174Q9BXC1 333 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 SLC32A1Q9H598 525 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 OLAHQ9NV23 265 aa9.43□□□□□ -0.9
CTCFL-222ENST00000609232 IGLV3-16A0A075B6K0 115 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 PRSS51A0A1B0GVH4 220 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 C5orf58C9J3I9 102 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 MANBAO00462 879 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 NUAK1O60285 661 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TMCC2O75069 709 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 B3GALNT1O75752 331 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF26P17031 533 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 ENGP17813 658 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 CTHP32929 405 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 MLLT1Q03111 559 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 GRSF1Q12849 480 aaKnown RBP eCLIP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 PRRT3Q5FWE3 981 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 CCNYL2Q5T2Q4 361 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TSSK4Q6SA08 328 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 CCDC116Q8IYX3 515 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 AADATQ8N5Z0 425 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 OR4A15Q8NGL6 344 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 ASB11Q8WXH4 323 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 RAB7BQ96AH8 199 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 COQ10AQ96MF6 247 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 SLC12A9Q9BXP2 914 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 RPF2Q9H7B2 306 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 WDR26Q9H7D7 661 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 EXOSC4Q9NPD3 245 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 SMOXQ9NWM0 555 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 CD207Q9UJ71 328 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 BTBD3Q9Y2F9 522 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TCF20Q9UGU0 1960 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 H3BN98 237 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 KLK8O60259 260 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 VPS4BO75351 444 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 C6orf47O95873 294 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 LDLRP01130 860 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 ETFAP13804 333 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 EIF2DP41214 584 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TXNL4AP83876 142 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 RPS26P11Q5JNZ5 115 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TAF8Q7Z7C8 310 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms