RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C1orf189Q5VU69 101 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 KANK2Q63ZY3 851 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 PRSS41Q7RTY9 318 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 DTX1Q86Y01 620 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 DSELQ8IZU8 1212 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 PROKR1Q8TCW9 393 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 SELENOMQ8WWX9 145 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 EXTL1Q92935 676 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 CLIP3Q96DZ5 547 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 CMTM7Q96FZ5 175 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 F2RL3Q96RI0 385 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 AKIRIN1Q9H9L7 192 aaPredicted RBP17.88■□□□□ 0.45
CCDC9-205ENST00000600117 TXLNGQ9NUQ3 528 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 TRAF6Q9Y4K3 522 aa17.88■□□□□ 0.45
CCDC9-205ENST00000600117 CENPEQ02224 2701 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 SERTM1A2A2V5 107 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 MEN1O00255 615 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 SH3BGRLO75368 114 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 SNUPNO95149 360 aaKnown RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 ONECUT2O95948 504 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 B3GALT4O96024 378 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 STXBP1P61764 594 aaKnown RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 PHEXP78562 749 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF33BQ06732 778 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 UGT3A2Q3SY77 523 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 SH2D4BQ5SQS7 431 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 DEPDC1Q5TB30 811 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 KHDRBS2Q5VWX1 349 aaKnown RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 ATG16L1Q676U5 607 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 LCN10Q6JVE6 187 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 C6orf15Q6UXA7 325 aaPredicted RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF517Q6ZMY9 492 aaPredicted RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 UBE3DQ7Z6J8 389 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 PDSS2Q86YH6 399 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 CLYBLQ8N0X4 340 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 ARFGAP2Q8N6H7 521 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 OR2L5Q8NG80 312 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 CKAP2Q8WWK9 683 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 GAL3ST3Q96A11 431 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 MVB12AQ96EY5 273 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 QRFPRQ96P65 431 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 HBEGFQ99075 208 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 SLC7A5P2Q9GIP4 190 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 REXO4Q9GZR2 422 aaKnown RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 OR51B5Q9H339 312 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 SLC22A11Q9NSA0 550 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.87■□□□□ 0.45
CCDC9-205ENST00000600117 RAP2CQ9Y3L5 183 aa17.87■□□□□ 0.45
CCDC9-205ENST00000600117 A0A0A6YYC8 382 aaPredicted RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 STMND1H3BQB6 276 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 I3L1I5 382 aaPredicted RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ERI3O43414 337 aaKnown RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 RAD1O60671 282 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ULK1O75385 1050 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 CRCPO75575 148 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 NSA2O95478 260 aaKnown RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ALOX12P18054 663 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 IL1RNP18510 177 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ALAS2P22557 587 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 PTX3P26022 381 aaPredicted RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 RAB8AP61006 207 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 OCRLQ01968 901 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 CUL3Q13618 768 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ABRAXAS2Q15018 415 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 TMEM35AQ53FP2 167 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ABHD17CQ6PCB6 329 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 SCIMPQ6UWF3 145 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 RNF165Q6ZSG1 346 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 METTL27Q8N6F8 245 aaPredicted RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ZNF781Q8N8C0 355 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 OR9A4Q8NGU2 314 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 AGR3Q8TD06 166 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 DYDC1Q8WWB3 177 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 ACPTQ9BZG2 426 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 TUBB1Q9H4B7 451 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 BRF2Q9HAW0 419 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 THAP1Q9NVV9 213 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 WDR70Q9NW82 654 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 NDOR1Q9UHB4 597 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 DNAJC15Q9Y5T4 150 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 TEP1Q99973 2627 aaKnown RBP17.86■□□□□ 0.45
CCDC9-205ENST00000600117 SCN3AQ9NY46 2000 aa17.86■□□□□ 0.45
CCDC9-205ENST00000600117 URADA6NGE7 173 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 GALR3O60755 368 aaPredicted RBP17.85■□□□□ 0.45
CCDC9-205ENST00000600117 KLHL18O94889 574 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 FAM87AP0C7U9 286 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 GP1BBP13224 206 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 HSD3B1P14060 373 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 HSD3B2P26439 372 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 CSTF3Q12996 717 aaKnown RBP17.85■□□□□ 0.45
CCDC9-205ENST00000600117 HERC3Q15034 1050 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 NKAIN1Q4KMZ8 207 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 DEFB134Q4QY38 66 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 PRMT9Q6P2P2 845 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 CHSY3Q70JA7 882 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 ABHD13Q7L211 337 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 NLGN4XQ8N0W4 816 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 ESX1Q8N693 406 aa17.85■□□□□ 0.45
CCDC9-205ENST00000600117 NLGN4YQ8NFZ3 816 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms