RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TMC8Q8IU68 726 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 RASGEF1AQ8N9B8 481 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 OR9Q2Q8NGE9 314 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 NEIL2Q969S2 332 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CIDECQ96AQ7 238 aaPredicted RBP15.82■□□□□ 0.12
LIG1-206ENST00000594067 TCF25Q9BQ70 676 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CENPOQ9BU64 300 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 SLC46A2Q9BY10 475 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CCDC59Q9P031 241 aaKnown RBP15.82■□□□□ 0.12
LIG1-206ENST00000594067 PCDHGA2Q9Y5H1 932 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 MYOFQ9NZM1 2061 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CXCL10P02778 98 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 CATP04040 527 aaKnown RBP15.82■□□□□ 0.12
LIG1-206ENST00000594067 ZNF8P17098 575 aaPredicted RBP15.82■□□□□ 0.12
LIG1-206ENST00000594067 SPIN4Q56A73 249 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 SLX4IPQ5VYV7 408 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 OR4C15Q8NGM1 316 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 OR5AK3PQ8NH89 298 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 TP53INP1Q96A56 240 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 SLC35A5Q9BS91 424 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 FBXL12Q9NXK8 326 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 SLC6A14Q9UN76 642 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 TMEM98Q9Y2Y6 226 aa15.82■□□□□ 0.12
LIG1-206ENST00000594067 RNASET2O00584 256 aaKnown RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 MED26O95402 600 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 CYP2A6P11509 494 aaPredicted RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 CRISP3P54108 245 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SCARB2Q14108 478 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 IER5LQ5T953 404 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 ZNF605Q86T29 641 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 STX19Q8N4C7 294 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 Q96MT0 163 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 MTG2Q9H4K7 406 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 NPC1O15118 1278 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SSX4O60224 188 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 TNFRSF21O75509 655 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 CCNKO75909 580 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SNX4O95219 450 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 PTHP01270 115 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 CTSAP10619 480 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 ZNF30P17039 623 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 KRR1Q13601 381 aaKnown RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 MICAQ29983 383 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 GCNT6Q5T4J0 391 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 NANOGNBQ7Z5D8 188 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 KBTBD8Q8NFY9 601 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 OR56A3Q8NH54 315 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 PXYLP1Q8TE99 480 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 RAD9AQ99638 391 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SDHCQ99643 169 aaPredicted RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 CEP44Q9C0F1 390 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 REEP4Q9H6H4 257 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 TRIM39Q9HCM9 518 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 TAS2R16Q9NYV7 291 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 EHD3Q9NZN3 535 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SH2B3Q9UQQ2 575 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 MAP4K5Q9Y4K4 846 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 PEX16Q9Y5Y5 336 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 OBSL1O75147 1896 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 LAMA2P24043 3122 aaKnown RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 A6NL46 340 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 TGM5O43548 720 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 LEFTY1O75610 366 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 LRG1P02750 347 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 HSMCR30P0CW71 290 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 ADORA3P0DMS8 318 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 ANXA8P13928 327 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 RECQLP46063 649 aaPredicted RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 PRIM2P49643 509 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 UGT2B15P54855 530 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 ARSIQ5FYB1 569 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 AGAP6Q5VW22 663 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 RSBN1Q5VWQ0 802 aaPredicted RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 MED27Q6P2C8 311 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 SLCO4C1Q6ZQN7 724 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 TRAM1L1Q8N609 369 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SORCS1Q8WY21 1168 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 METTL2AQ96IZ6 378 aaKnown RBP15.81■□□□□ 0.12
LIG1-206ENST00000594067 AGAP4Q96P64 663 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 SPG21Q9NZD8 308 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 MKLN1Q9UL63 735 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 POFUT2Q9Y2G5 429 aa15.81■□□□□ 0.12
LIG1-206ENST00000594067 PCDH17O14917 1159 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 TGFB1P01137 390 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 ETV6P41212 452 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 RGS6P49758 472 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 ST3GAL4Q11206 333 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 ARMCX4Q5H9R4 360 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 HENMT1Q5T8I9 393 aaKnown RBP15.8■□□□□ 0.12
LIG1-206ENST00000594067 CYB5D2Q8WUJ1 264 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 GTPBP3Q969Y2 492 aaKnown RBP15.8■□□□□ 0.12
LIG1-206ENST00000594067 CHCHD6Q9BRQ6 235 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 CCM2Q9BSQ5 444 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 BHLHE41Q9C0J9 482 aaPredicted RBP15.8■□□□□ 0.12
LIG1-206ENST00000594067 DUSP12Q9UNI6 340 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 KCNE2Q9Y6J6 123 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 SLC5A10A0PJK1 596 aa15.8■□□□□ 0.12
LIG1-206ENST00000594067 PXNP49023 591 aaPredicted RBP15.8■□□□□ 0.12
LIG1-206ENST00000594067 GANABQ14697 944 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms