RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 HIST1H1TP22492 207 aaPredicted RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 RPL3P39023 403 aaKnown RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 TRA2BP62995 288 aaKnown RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 MC1RQ01726 317 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 C2orf80Q0P641 193 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 CPTPQ5TA50 214 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 ANKRD26P1Q6NSI1 321 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 R3HCC1LQ7Z5L2 792 aaKnown RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 HPS6Q86YV9 775 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 OR6C4Q8NGE1 309 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 TM4SF18Q96CE8 201 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 ZDHHC12Q96GR4 267 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 AHCYL2Q96HN2 611 aaKnown RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 DENND2DQ9H6A0 471 aaPredicted RBP19.78■□□□□ 0.76
PNKP-203ENST00000593946 RMND5AQ9H871 391 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 ADA2Q9NZK5 511 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 NEUROG3Q9Y4Z2 214 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 PCDHGA5Q9Y5G8 931 aa19.78■□□□□ 0.76
PNKP-203ENST00000593946 DUX1O43812 170 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 SORBS2O94875 1100 aaKnown RBP19.77■□□□□ 0.76
PNKP-203ENST00000593946 SCELO95171 688 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 B3GALT4O96024 378 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 PNLIPP16233 465 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 ATP5A1P25705 553 aaKnown RBP19.77■□□□□ 0.76
PNKP-203ENST00000593946 PPM1FP49593 454 aaPredicted RBP19.77■□□□□ 0.76
PNKP-203ENST00000593946 SLC7A2P52569 658 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 KLC1Q07866 573 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 TGM3Q08188 693 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 NR0B2Q15466 257 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 C6orf10Q5SRN2 563 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 CYB5D1Q6P9G0 228 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 ZCCHC7Q8N3Z6 543 aaKnown RBP19.77■□□□□ 0.76
PNKP-203ENST00000593946 DNAJB8Q8NHS0 232 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 UTP15Q8TED0 518 aaKnown RBP19.77■□□□□ 0.76
PNKP-203ENST00000593946 CCDC74AQ96AQ1 378 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 TCTN2Q96GX1 697 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 ITCHQ96J02 903 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 DUSP26Q9BV47 211 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 ARRDC1-AS1Q9H2J1 176 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 GMEB2Q9UKD1 530 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 PACSIN3Q9UKS6 424 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 SPTBP11277 2137 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 GPR179Q6PRD1 2367 aa19.77■□□□□ 0.76
PNKP-203ENST00000593946 HCRTR1O43613 425 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 PCDHGA12O60330 932 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 SMIM10L1P0DMW3 83 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 NUBP1P53384 320 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 RAB8AP61006 207 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 PLIN5Q00G26 463 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ZNF385BQ569K4 471 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 MANEAQ5SRI9 462 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 LRIF1Q5T3J3 769 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 DGLUCYQ7Z3D6 616 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 NET1Q7Z628 596 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 SPRED1Q7Z699 444 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 SLC15A3Q8IY34 581 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ZNF655Q8N720 491 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 ACOT4Q8N9L9 421 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 OR8K5Q8NH50 307 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 WDR60Q8WVS4 1066 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CCDC124Q96CT7 223 aaKnown RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 SMIM10Q96HG1 83 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CGREF1Q99674 301 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CHRNA10Q9GZZ6 450 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 KCNH6Q9H252 994 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 SMOC1Q9H4F8 434 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 PCDHA9Q9Y5H5 950 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 R4GN57 208 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 MN1Q10571 1320 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 IGHV5-51A0A0C4DH38 117 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 URADA6NGE7 173 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 NME4O00746 187 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ZSCAN9O15535 394 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 MGRN1O60291 552 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CIB2O75838 187 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ZNF888P0CJ79 500 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 CD1CP29017 333 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 HNRNPFP52597 415 aaKnown RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 CFHR1Q03591 330 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CCDC6Q16204 474 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ZC3H12BQ5HYM0 836 aaKnown RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 MRM1Q6IN84 353 aaKnown RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 NANOGP8Q6NSW7 305 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ZC3H14Q6PJT7 736 aaKnown RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 ANKRD46Q86W74 232 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 MMP21Q8N119 569 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CARFQ8N187 725 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 DNAJC22Q8N4W6 341 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 Q8N9G6 341 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 DNAJB14Q8TBM8 379 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 TMEM125Q96AQ2 219 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 BHLHE41Q9C0J9 482 aaPredicted RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 PAIP1Q9H074 479 aaKnown RBP19.76■□□□□ 0.75
PNKP-203ENST00000593946 NANOGQ9H9S0 305 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 ATAD3AQ9NVI7 634 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 VAPAQ9P0L0 249 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 SH3BP4Q9P0V3 963 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 CD300AQ9UGN4 299 aa19.76■□□□□ 0.75
PNKP-203ENST00000593946 A0A096LPI6 279 aa19.75■□□□□ 0.75
PNKP-203ENST00000593946 TRBV5-3A0A0A0MS03 114 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms