RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 GDF5P43026 501 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 HLCSP50747 726 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 ADORA2A-AS1P86434 159 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 TSNQ15631 228 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 TMIGD1Q6UXZ0 262 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 CREG2Q8IUH2 290 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 SIAH3Q8IW03 269 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 KRT78Q8N1N4 520 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 NFAM1Q8NET5 270 aaPredicted RBP16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 ANKRD49Q8WVL7 239 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 CCT6BQ92526 530 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 GAL3ST3Q96A11 431 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 POPDC3Q9HBV1 291 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 MOCS1Q9NZB8 636 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 MEMO1Q9Y316 297 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 SAR1BQ9Y6B6 198 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 CACNA1CQ13936 2221 aa16.78■□□□□ 0.28
PRKCSH-211ENST00000590098 OTOGQ6ZRI0 2925 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 A0A088AWK7 358 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 EFCAB8A8MWE9 144 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 CCDC188H7C350 402 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 MYO1DO94832 1006 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 ZNF10P21506 573 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 HPDP32754 393 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 CLCN2P51788 898 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 GNG11P61952 73 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 SLBPQ14493 270 aaKnown RBP eCLIP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 FASTKD3Q14CZ7 662 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 SLCO4C1Q6ZQN7 724 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 GDF7Q7Z4P5 450 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 CEP97Q8IW35 865 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 CPSF7Q8N684 471 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 ADAMTS18Q8TE60 1221 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 RHBDF1Q96CC6 855 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 NPLQ9BXD5 320 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 CAPS2Q9BXY5 557 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 RHOJQ9H4E5 214 aa16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 TRIM45Q9H8W5 580 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 PNO1Q9NRX1 252 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 KLF13Q9Y2Y9 288 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-211ENST00000590098 FBN2P35556 2912 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 TRBV11-1A0A0K0K1C0 115 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 NCF1BA6NI72 391 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 NCF1CA8MVU1 366 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 C4orf51C9J302 202 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 KLRC4-KLRK1H3BQV0 150 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 CLDN4O14493 209 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 PRRG2O14669 202 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 ERI3O43414 337 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 SNRPB2P08579 225 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 NCF1P14598 390 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 ELAVL4P26378 380 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 GSTM2P28161 218 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 SLC6A12P48065 614 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 TERF2Q15554 542 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 C18orf21Q32NC0 220 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 KLHDC8AQ8IYD2 350 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 ZBED8Q8IZ13 594 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 TCAIMQ8N3R3 496 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 TMEM156Q8N614 296 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 POGLUT1Q8NBL1 392 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 SEC16BQ96JE7 1060 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 CCDC77Q9BR77 488 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 AICDAQ9GZX7 198 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 CNOT10Q9H9A5 744 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 PRTFDC1Q9NRG1 225 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 FBXW2Q9UKT8 454 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 MRPS33Q9Y291 106 aaKnown RBP16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 PDZD2O15018 2839 aa16.76■□□□□ 0.27
PRKCSH-211ENST00000590098 TEP1Q99973 2627 aaKnown RBP16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 A0A0G2JN53 185 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 LRIT2A6NDA9 550 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 ANKDD1BA6NHY2 528 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 E7ESA3 106 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 B3GALT2O43825 422 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 CLDN14O95500 239 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 HSD17B7P56937 341 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 HSF1Q00613 529 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 POU4F1Q01851 419 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 SLC13A2Q13183 592 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 RUNX2Q13950 521 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 TGFBIQ15582 683 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 RNFT1Q5M7Z0 435 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 CAPN12Q6ZSI9 719 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 ZNF227Q86WZ6 799 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 EID3Q8N140 333 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 ARMC10Q8N2F6 343 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 APCDD1LQ8NCL9 501 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 BBOF1Q8ND07 529 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 AGAP11Q8TF27 550 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 PYROXD1Q8WU10 500 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 MS4A6EQ96DS6 147 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 VMP1Q96GC9 406 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms