RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PLPP1O14494 284 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 DNAJB6O75190 326 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 PIM1P11309 404 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 RAP1GDS1P52306 607 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 TGM3Q08188 693 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 CUL3Q13618 768 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 MRPL14Q6P1L8 145 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 ZNF793Q6ZN11 406 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 OVCH1Q7RTY7 1134 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 SPACA3Q8IXA5 215 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 KIAA1143Q96AT1 154 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 FKBP10Q96AY3 582 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 KCNC2Q96PR1 638 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 SORT1Q99523 831 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 SERPINI1Q99574 410 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 SORBS1Q9BX66 1292 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 BRF2Q9HAW0 419 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 PRDM7Q9NQW5 492 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 IL17BQ9UHF5 180 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 GPN3Q9UHW5 284 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 SLC12A4Q9UP95 1085 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 MRPS18BQ9Y676 258 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 NUP210LQ5VU65 1888 aa17.97■□□□□ 0.47
CLPTM1-209ENST00000588855 SCN2AQ99250 2005 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 C21orf140B9A014 251 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 RRP8O43159 456 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 CERS1P27544 350 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 RPS18P62269 152 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 SKP1P63208 163 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 CSTF3Q12996 717 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 FAM69BQ5VUD6 431 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 NIPAL1Q6NVV3 410 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 TMEM151BQ8IW70 566 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 TRIM42Q8IWZ5 723 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 SRFBP1Q8NEF9 429 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 RAB3IL1Q8TBN0 382 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 RGMAQ96B86 450 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 CENPKQ9BS16 269 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 YIPF2Q9BWQ6 316 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 ZNF717Q9BY31 904 aaPredicted RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 ACPTQ9BZG2 426 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 MANSC1Q9H8J5 431 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 COPS7BQ9H9Q2 264 aaPredicted RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 INTS9Q9NV88 658 aaKnown RBP17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 TRPC4Q9UBN4 977 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 TRAF6Q9Y4K3 522 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 MAP4K5Q9Y4K4 846 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 PTGDR2Q9Y5Y4 395 aa17.96■□□□□ 0.47
CLPTM1-209ENST00000588855 SEMA3DO95025 777 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 FGF4P08620 206 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 RAB40ALP0C0E4 278 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 HSD3B1P14060 373 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 WT1P19544 449 aaPredicted RBP17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 HSD3B2P26439 372 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 SSR2P43308 183 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 HMGCS1Q01581 520 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 ZNF33BQ06732 778 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 CLYBLQ8N0X4 340 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 ZNF781Q8N8C0 355 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 DYDC1Q8WWB3 177 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 CNTNAP3BQ96NU0 1288 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 TBCDQ9BTW9 1192 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 MRPL1Q9BYD6 325 aaKnown RBP17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 CNTNAP3Q9BZ76 1288 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 SLC26A1Q9H2B4 701 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 TUBB1Q9H4B7 451 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 ZNF282Q9UDV7 671 aaPredicted RBP17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 FARSAQ9Y285 508 aaKnown RBP17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 DNAJC15Q9Y5T4 150 aa17.95■□□□□ 0.46
CLPTM1-209ENST00000588855 IGLV3-12A0A075B6K2 115 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 A0A088AWK7 358 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 SNNO75324 88 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 ALBP02768 609 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 ZNF10P21506 573 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 ATP5A1P25705 553 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 MTTPP55157 894 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 RPS15P62841 145 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 NKG7Q16617 165 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 AP5B1Q2VPB7 878 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 UGT3A2Q3SY77 523 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 VWA2Q5GFL6 755 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 ATG16L1Q676U5 607 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 OR4C11Q6IEV9 310 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 CA13Q8N1Q1 262 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 GBP7Q8N8V2 638 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 OR51Q1Q8NH59 317 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 TWIST2Q8WVJ9 160 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 ZNF75CPQ92670 426 aaPredicted RBP17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 SERINC2Q96SA4 455 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 GPR87Q9BY21 358 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 RBCK1Q9BYM8 510 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 ACTL8Q9H568 366 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 KCND3Q9UK17 655 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 SSUH2Q9Y2M2 353 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 RAP2CQ9Y3L5 183 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 PCDHGA6Q9Y5G7 932 aa17.94■□□□□ 0.46
CLPTM1-209ENST00000588855 SERTM1A2A2V5 107 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 VSTM2BA6NLU5 285 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 CHST10O43529 356 aa17.93■□□□□ 0.46
CLPTM1-209ENST00000588855 B3GALT2O43825 422 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms