RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 C18orf21Q32NC0 220 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 NXPE4Q6UWF7 544 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 CAPN12Q6ZSI9 719 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 CLNKQ7Z7G1 428 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 DOLPP1Q86YN1 238 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 SULF2Q8IWU5 870 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 KLHL7Q8IXQ5 586 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 EID3Q8N140 333 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 PDIK1LQ8N165 341 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 CAPZA3Q96KX2 299 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 SARGQ9BW04 601 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 COQ3Q9NZJ6 369 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 ZFATQ9P243 1243 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 CORO1CQ9ULV4 474 aaPredicted RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 KCNE2Q9Y6J6 123 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 CSMD2Q7Z408 3487 aa12.81□□□□□ -0.36
HDAC5-208ENST00000588419 TEP1Q99973 2627 aaKnown RBP12.81□□□□□ -0.36
HDAC5-208ENST00000588419 INTS1Q8N201 2190 aaKnown RBP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 MYOCOSA0A1B0GUC4 107 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 FAM95CA0A1B0GW59 222 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 FAM90A27PA6NNH2 459 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 ERI3O43414 337 aaKnown RBP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 ITGA10O75578 1167 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 PDE9AO76083 593 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 PPP2R1BP30154 601 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 SSTR2P30874 369 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 PTGS2P35354 604 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 STXBP1P61764 594 aaKnown RBP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 SLC13A2Q13183 592 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 SLBPQ14493 270 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 MEX3BQ6ZN04 569 aaKnown RBP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 CEP128Q6ZU80 1094 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 FGD2Q7Z6J4 655 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 STRA8Q7Z7C7 330 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 ZNF227Q86WZ6 799 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 ZNF295-AS1Q8N0V1 137 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 B3GNT7Q8NFL0 401 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 NCLNQ969V3 563 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 WDR83Q9BRX9 315 aaKnown RBP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 TRIM31Q9BZY9 425 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 AICDAQ9GZX7 198 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
HDAC5-208ENST00000588419 PLAC1Q9HBJ0 212 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 PRTFDC1Q9NRG1 225 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 SNX12Q9UMY4 172 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 ERVK-11Q9UQG0 969 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 ASB1Q9Y576 335 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 PSAT1Q9Y617 370 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 FBN2P35556 2912 aa12.8□□□□□ -0.36
HDAC5-208ENST00000588419 IGKV3D-11A0A0A0MRZ8 115 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 E9PLN8 166 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 CLGNO14967 610 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 PEX1O43933 1283 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 SERPINA6P08185 405 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 HNRNPH1P31943 449 aaKnown RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 GDF5P43026 501 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 KRTAP10-9P60411 292 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 PLGLB1Q02325 96 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 TLE4Q04727 773 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 TSNQ15631 228 aaKnown RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 PPP1R3AQ16821 1122 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 FBXO48Q5FWF7 155 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 C16orf47Q6ZP98 133 aaPredicted RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 GALNT7Q86SF2 657 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 POGLUT1Q8NBL1 392 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 NFAM1Q8NET5 270 aaPredicted RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 GAL3ST3Q96A11 431 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 VMP1Q96GC9 406 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 VKORC1Q9BQB6 163 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 COPS7BQ9H9Q2 264 aaPredicted RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
HDAC5-208ENST00000588419 WWOXQ9NZC7 414 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 KCMF1Q9P0J7 381 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 CTNNAL1Q9UBT7 734 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 MMACHCQ9Y4U1 282 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 OARD1Q9Y530 152 aa12.79□□□□□ -0.36
HDAC5-208ENST00000588419 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 NCKAP5O14513 1909 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 ARHGAP21Q5T5U3 1957 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 FAM166BA8MTA8 275 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 A8MVJ9 347 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 G3V3Y1 287 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 B3GALT2O43825 422 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 H2AFYO75367 372 aaKnown RBP12.78□□□□□ -0.36
HDAC5-208ENST00000588419 IFNA16P05015 189 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 TFEBP19484 476 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 SSR4P51571 173 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 HNRNPFP52597 415 aaKnown RBP12.78□□□□□ -0.36
HDAC5-208ENST00000588419 PLA2G16P53816 162 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 SLC12A2P55011 1212 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 ARL4CP56559 192 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 RAB38P57729 211 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 BMPR2Q13873 1038 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 RUNX2Q13950 521 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
HDAC5-208ENST00000588419 MDGA2Q7Z553 956 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms