RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CHTF18Q8WVB6 975 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 CCT6BQ92526 530 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 SMIM10Q96HG1 83 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 PDLIM2Q96JY6 352 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 FAR2Q96K12 515 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 DMRTA2Q96SC8 542 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 EGFL8Q99944 293 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
ERCC1-205ENST00000587888 CLK4Q9HAZ1 481 aaKnown RBP13.22□□□□□ -0.29
ERCC1-205ENST00000587888 PLAC1Q9HBJ0 212 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 COQ3Q9NZJ6 369 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 CHMP2BQ9UQN3 213 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 PDZD2O15018 2839 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 GTF3C1Q12789 2109 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 ABCA12Q86UK0 2595 aa13.22□□□□□ -0.29
ERCC1-205ENST00000587888 NPEPPSL1A6NEC2 478 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 H2AFYO75367 372 aaKnown RBP13.21□□□□□ -0.29
ERCC1-205ENST00000587888 ITGA10O75578 1167 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 SERPINA6P08185 405 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 TLE4Q04727 773 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 RUNX2Q13950 521 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-205ENST00000587888 MDGA2Q7Z553 956 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 GALNT7Q86SF2 657 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 CYP4Z2PQ8N1L4 340 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 SLC35F6Q8N357 371 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 POGLUT1Q8NBL1 392 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 APCDD1LQ8NCL9 501 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 B3GNT7Q8NFL0 401 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 SREK1Q8WXA9 508 aaKnown RBP13.21□□□□□ -0.29
ERCC1-205ENST00000587888 PDLIM5Q96HC4 596 aaKnown RBP13.21□□□□□ -0.29
ERCC1-205ENST00000587888 SPOCK3Q9BQ16 436 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 DDX47Q9H0S4 455 aaKnown RBP13.21□□□□□ -0.29
ERCC1-205ENST00000587888 DEFB127Q9H1M4 99 aa13.21□□□□□ -0.29
ERCC1-205ENST00000587888 FBN2P35556 2912 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 MYOCOSA0A1B0GUC4 107 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 C1GALT1C1LP0DN25 315 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 TFEBP19484 476 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 CAPN3P20807 821 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 PPP2R1BP30154 601 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 GDF5P43026 501 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 STXBP1P61764 594 aaKnown RBP13.2□□□□□ -0.3
ERCC1-205ENST00000587888 SLC13A2Q13183 592 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 ZNF460Q14592 562 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 PPP1R3AQ16821 1122 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 C16orf47Q6ZP98 133 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-205ENST00000587888 ANKMY2Q8IV38 441 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 OR52N2Q8NGI0 321 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 PRTFDC1Q9NRG1 225 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 KCMF1Q9P0J7 381 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 CORO1CQ9ULV4 474 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-205ENST00000587888 ERVK-11Q9UQG0 969 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 PCNX1Q96RV3 2341 aa13.2□□□□□ -0.3
ERCC1-205ENST00000587888 USP27XA6NNY8 438 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 CLDN4O14493 209 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 ERI3O43414 337 aaKnown RBP13.19□□□□□ -0.3
ERCC1-205ENST00000587888 WDR47O94967 919 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 HNRNPH1P31943 449 aaKnown RBP13.19□□□□□ -0.3
ERCC1-205ENST00000587888 SSR4P51571 173 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 NR0B1P51843 470 aaKnown RBP13.19□□□□□ -0.3
ERCC1-205ENST00000587888 PLA2G16P53816 162 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 BMPR2Q13873 1038 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 CMPK2Q5EBM0 449 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 CLNKQ7Z7G1 428 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERCC1-205ENST00000587888 KLHDC8AQ8IYD2 350 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 ARMC10Q8N2F6 343 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 MARVELD2Q8N4S9 558 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 NKAPQ8N5F7 415 aaKnown RBP13.19□□□□□ -0.3
ERCC1-205ENST00000587888 FAM47BQ8NA70 645 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 TMEM52Q8NDY8 209 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 C16orf52Q8NHV5 167 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 NCLNQ969V3 563 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 C14orf79Q96F83 325 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 VMP1Q96GC9 406 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 UCK2Q9BZX2 261 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 ENKD1Q9H0I2 346 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 TIMMDC1Q9NPL8 285 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 ZNF223Q9UK11 482 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-205ENST00000587888 MMACHCQ9Y4U1 282 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 PSAT1Q9Y617 370 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 PKDREJQ9NTG1 2253 aa13.19□□□□□ -0.3
ERCC1-205ENST00000587888 NKX2-6A6NCS4 301 aa13.18□□□□□ -0.3
ERCC1-205ENST00000587888 LRIT2A6NDA9 550 aa13.18□□□□□ -0.3
ERCC1-205ENST00000587888 NCF1BA6NI72 391 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-205ENST00000587888 NCF1CA8MVU1 366 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-205ENST00000587888 TGFBR3LH3BV60 316 aa13.18□□□□□ -0.3
ERCC1-205ENST00000587888 PRKNO60260 465 aaPredicted RBP13.18□□□□□ -0.3
ERCC1-205ENST00000587888 OR2J2O76002 312 aa13.18□□□□□ -0.3
ERCC1-205ENST00000587888 ZFAND5O76080 213 aa13.18□□□□□ -0.3
ERCC1-205ENST00000587888 IFNA16P05015 189 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms