RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 EFTUD2Q15029 972 aaKnown RBP eCLIP16.78■□□□□ 0.284e-14■■□□□ 12.8
SRSF1-209ENST00000585096 TBCCQ15814 346 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 MROH9Q5TGP6 573 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 TRIM40Q6P9F5 258 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 BEST3Q8N1M1 668 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 MMGT1Q8N4V1 131 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 OR2L5Q8NG80 312 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 ADAMTS18Q8TE60 1221 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 UBE2E3Q969T4 207 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 MRRFQ96E11 262 aaKnown RBP16.78■□□□□ 0.28
SRSF1-209ENST00000585096 C5orf34Q96MH7 638 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 SLX1AQ9BQ83 275 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 REXO4Q9GZR2 422 aaKnown RBP16.78■□□□□ 0.28
SRSF1-209ENST00000585096 AICDAQ9GZX7 198 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 IGSF5Q9NSI5 407 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 MMACHCQ9Y4U1 282 aa16.78■□□□□ 0.28
SRSF1-209ENST00000585096 SHANK1Q9Y566 2161 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 CCDC189A1A4V9 331 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 SUPT3HB4E1H0 165 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 C4orf51C9J302 202 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 FAM227AF5H4B4 570 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 E2F3O00716 465 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 CLDN4O14493 209 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 SUPT3HO75486 399 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 RASAL1O95294 804 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 CRYABP02511 175 aaKnown RBP16.77■□□□□ 0.28
SRSF1-209ENST00000585096 TUBB4AP04350 444 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 MAOAP21397 527 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 DLG1Q12959 904 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 CHIT1Q13231 466 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 UAP1Q16222 522 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-209ENST00000585096 FAM83EQ2M2I3 478 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 ADPRMQ3LIE5 342 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 FCRLBQ6BAA4 426 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 RELL1Q8IUW5 271 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 LGI4Q8N135 537 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 UTP23Q9BRU9 249 aaKnown RBP16.77■□□□□ 0.28
SRSF1-209ENST00000585096 PRM3Q9NNZ6 103 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 OPTCQ9UBM4 332 aa16.77■□□□□ 0.28
SRSF1-209ENST00000585096 ERRFI1Q9UJM3 462 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-209ENST00000585096 ZNF490Q9ULM2 529 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-209ENST00000585096 USP9YO00507 2555 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-209ENST00000585096 IGKV3D-11A0A0A0MRZ8 115 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 A0A0G2JN53 185 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 K7EPI3 171 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 CDK2AP1O14519 115 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 PRAMEF4O60810 478 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 C2P06681 752 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 GMPRP36959 345 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 CASP2P42575 452 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 PLA2G16P53816 162 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 BMPR2Q13873 1038 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 RUNX2Q13950 521 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 RCN2Q14257 317 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 PRAMEF9Q5VWM5 478 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 VN1R5Q7Z5H4 357 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 DNAJB8Q8NHS0 232 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 RHEBL1Q8TAI7 183 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 ELP5Q8TE02 316 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 UBTD2Q8WUN7 234 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 KCTD4Q8WVF5 259 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 NXNL1Q96CM4 212 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 TAAR6Q96RI8 345 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 SERINC2Q96SA4 455 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 ATOH8Q96SQ7 321 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 ROGDIQ9GZN7 287 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 COPS7BQ9H9Q2 264 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-209ENST00000585096 SNX15Q9NRS6 342 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 NINJ2Q9NZG7 142 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 MRPS33Q9Y291 106 aaKnown RBP16.76■□□□□ 0.27
SRSF1-209ENST00000585096 COL12A1Q99715 3063 aa16.76■□□□□ 0.27
SRSF1-209ENST00000585096 DOPEY2Q9Y3R5 2298 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 SAGE2PA6NJ88 616 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 UBXN8O00124 270 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 CTAGE8P0CG41 777 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 EPORP19235 508 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 MTTPP55157 894 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 HSD17B7P56937 341 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 RAB38P57729 211 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 TUBA3CQ13748 450 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 ACAP2Q15057 778 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 GLE1Q53GS7 698 aaKnown RBP16.75■□□□□ 0.27
SRSF1-209ENST00000585096 ZNF766Q5HY98 468 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 ZNF324BQ6AW86 544 aaPredicted RBP16.75■□□□□ 0.27
SRSF1-209ENST00000585096 KLC3Q6P597 504 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 ABHD17CQ6PCB6 329 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 TUBA3EQ6PEY2 450 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 RPS19BP1Q86WX3 136 aaKnown RBP16.75■□□□□ 0.27
SRSF1-209ENST00000585096 CTAGE4Q8IX94 777 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 HORMAD2Q8N7B1 307 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 SRFBP1Q8NEF9 429 aaKnown RBP16.75■□□□□ 0.27
SRSF1-209ENST00000585096 IFT81Q8WYA0 676 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 NR4A3Q92570 626 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 QRFPRQ96P65 431 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 ACSS3Q9H6R3 686 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 NECTIN3Q9NQS3 549 aa16.75■□□□□ 0.27
SRSF1-209ENST00000585096 PRTFDC1Q9NRG1 225 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms