RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 HS3ST4Q9Y661 456 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 A0A0G2JN53 185 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 CCL16O15467 120 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 F7P08709 466 aaPredicted RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 BMP2P12643 396 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 UQCRC2P22695 453 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 ERVK-21P61565 698 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 SPHARQ15513 63 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 GLT8D1Q68CQ7 371 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 DCDC5Q6ZRR9 648 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 RIOK2Q9BVS4 552 aaKnown RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 REEP4Q9H6H4 257 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 PCDHB16Q9NRJ7 776 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 AGAP5A6NIR3 686 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 F5H0A9 414 aaPredicted RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 SLC1A7O00341 560 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 EEF1E1O43324 174 aaKnown RBP12.61□□□□□ -0.39
RNF43-208ENST00000584437 GRID2O43424 1007 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 ALPIP09923 528 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 HSD17B1P14061 328 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 RGS19P49795 217 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 NRG3P56975 720 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 NPRL3Q12980 569 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 PLPP4Q5VZY2 271 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 RNF130Q86XS8 419 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 THEM6Q8WUY1 208 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 TRIB3Q96RU7 358 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 GIMAP2Q9UG22 337 aa12.61□□□□□ -0.39
RNF43-208ENST00000584437 HTR2BP41595 481 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 GDF5P43026 501 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 LEPRP48357 1165 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 CD97P48960 835 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 RABGGTBP53611 331 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SP3Q02447 781 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 KANK2Q63ZY3 851 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 RPL13AP3Q6NVV1 102 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 ABCG5Q9H222 651 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SLA2Q9H6Q3 261 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 MSRAQ9UJ68 235 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 ASB3Q9Y575 518 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 LRRTM2O43300 516 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 MRPS14O60783 128 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 PTPN2P17706 415 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 RBMXP38159 391 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 NAPRTQ6XQN6 538 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 ZNF565Q8N9K5 539 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 FBXO22Q8NEZ5 403 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 OR2AP1Q8NGE2 309 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SLC5A11Q8WWX8 675 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 Q9N2J8 555 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 FARSAQ9Y285 508 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 E7EQ34 232 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SLC33A1O00400 549 aaPredicted RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 PCDH17O14917 1159 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 VIPR1P32241 457 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 KDELR2P33947 212 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 DPY19L3Q6ZPD9 716 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 TPRG1Q6ZUI0 275 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 RPS27LQ71UM5 84 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 GET4Q7L5D6 327 aaPredicted RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 OR13J1Q8NGT2 312 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 PFDN5Q99471 154 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 ZFR2Q9UPR6 939 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 PADI2Q9Y2J8 665 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SMIM30A4D0T7 59 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 SH3D21A4FU49 640 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 HOXC12P31275 282 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 DGKEP52429 567 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 RPS13P62277 151 aaKnown RBP12.6□□□□□ -0.39
RNF43-208ENST00000584437 TPGS2Q68CL5 300 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 ZFAND4Q86XD8 727 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 PDZD9Q8IXQ8 264 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 KCNN3Q9UGI6 736 aa12.6□□□□□ -0.39
RNF43-208ENST00000584437 ARPC4-TTLL3A0A0A6YYG9 625 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 RORAP35398 523 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ZDHHC14Q8IZN3 488 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 TSGA13Q96PP4 275 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ANKRD60Q9BZ19 345 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 SOX17Q9H6I2 414 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 C9IYK1 514 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 CREBL2O60519 120 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 OXSR1O95747 527 aaPredicted RBP12.59□□□□□ -0.39
RNF43-208ENST00000584437 IFNA2P01563 188 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 APOC3P02656 99 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 GJA9P57773 515 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 CHAF1BQ13112 559 aa12.59□□□□□ -0.39
RNF43-208ENST00000584437 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms