RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZNF33BQ06732 778 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 GRM7Q14831 915 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SMU1Q2TAY7 513 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 FBXO48Q5FWF7 155 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 XKR6Q5GH73 641 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 WASHC2DQ5SRD0 308 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 YOD1Q5VVQ6 348 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 CLEC6AQ6EIG7 209 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 OGFOD2Q6N063 350 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SLCO4C1Q6ZQN7 724 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 KIF2BQ8N4N8 673 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 TTC29Q8NA56 475 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 TTLQ8NG68 377 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 OR1L3Q8NH93 324 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 METTL6Q8TCB7 284 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 EXTL1Q92935 676 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 UBE2E3Q969T4 207 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 TUBGCP3Q96CW5 907 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC7A6OSQ96CW6 309 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 WDR34Q96EX3 536 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 PPP1R36Q96LQ0 422 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 ZNF285Q96NJ3 590 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 CATSPER2Q96P56 530 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC25A23Q9BV35 468 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SARGQ9BW04 601 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 ULBP3Q9BZM4 244 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC7A5P2Q9GIP4 190 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 NOL11Q9H8H0 719 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 IPPKQ9H8X2 491 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 ZBTB26Q9HCK0 441 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 ENAMQ9NRM1 1142 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
CSNK1D-220ENST00000581737 PTPN13Q12923 2485 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 H0YGG7 62 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 STMND1H3BQB6 276 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC28A1O00337 649 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 PIP5K1BO14986 540 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 RGS14O43566 566 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 UGDHO60701 494 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CPNE3O75131 537 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 KRT16P08779 473 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SLC35G6P0C7Q6 338 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 AHRP35869 848 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CASP2P42575 452 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ARSFP54793 590 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 VSX2P58304 361 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ARF3P61204 181 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 KCNJ2P63252 427 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ELF3P78545 371 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CUL3Q13618 768 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SLBPQ14493 270 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SNCBQ16143 134 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ATP6AP1LQ52LC2 224 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 FBXO42Q6P3S6 717 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CHSY3Q70JA7 882 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SYVN1Q86TM6 617 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 TREML1Q86YW5 311 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 MIER2Q8N344 545 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CSNK1A1LQ8N752 337 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 MFSD9Q8NBP5 474 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CAMKVQ8NCB2 501 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 PPP3R2Q96LZ3 170 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 NSUN5Q96P11 429 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 OR2A5Q96R48 311 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 CCNL2Q96S94 520 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 NDC1Q9BTX1 674 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 NTMT1Q9BV86 223 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 MRPL1Q9BYD6 325 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 FAM117AQ9C073 453 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 NT5DC2Q9H857 520 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ACTR8Q9H981 624 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 EFCAB1Q9HAE3 211 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ACSS2Q9NR19 701 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 STARD5Q9NSY2 213 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 FOXJ2Q9P0K8 574 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 PRPF19Q9UMS4 504 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SNX6Q9UNH7 406 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 TMEM184BQ9Y519 407 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 ASB1Q9Y576 335 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 DNAJC15Q9Y5T4 150 aa12.84□□□□□ -0.35
CSNK1D-220ENST00000581737 SEC16AO15027 2179 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 SDK2Q58EX2 2172 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 DYTNA2CJ06 578 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 PSMD12O00232 456 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 UBFD1O14562 309 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 SUV39H1O43463 412 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 OR1F1O43749 312 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 NRP2O60462 931 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 STK17BO94768 372 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 OR4F21O95013 312 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 CLDN9O95484 217 aa12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 EIF2S1P05198 315 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-220ENST00000581737 FAM87AP0C7U9 286 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms