RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TBX6O95947 436 aaPredicted RBP9.37□□□□□ -0.91
GGA3-209ENST00000580646 HSD3B1P14060 373 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 ALOX12P18054 663 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 HSD3B2P26439 372 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 AVPR1BP47901 424 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 SERPINB4P48594 390 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 CDH13P55290 713 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TGM3Q08188 693 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 CUL3Q13618 768 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 DSG2Q14126 1118 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 NCF4Q15080 339 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 RBBP7Q16576 425 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 NKAIN1Q4KMZ8 207 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TMEM35AQ53FP2 167 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 LACTB2Q53H82 288 aaPredicted RBP9.37□□□□□ -0.91
GGA3-209ENST00000580646 CFAP157Q5JU67 520 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 C1orf189Q5VU69 101 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 FAM69BQ5VUD6 431 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 MLIPQ5VWP3 458 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 FRG2Q64ET8 278 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TCTN3Q6NUS6 607 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
GGA3-209ENST00000580646 LETMD1Q6P1Q0 360 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 RNF165Q6ZSG1 346 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 GPRIN3Q6ZVF9 776 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 MED25Q71SY5 747 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 VN1R5Q7Z5H4 357 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 KCT2Q8NC54 265 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 ADAMTS17Q8TE56 1095 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TRPC4APQ8TEL6 797 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 AGAP11Q8TF27 550 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 CMTM7Q96FZ5 175 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 FRG2BQ96QU4 278 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 GATA5Q9BWX5 397 aaPredicted RBP9.37□□□□□ -0.91
GGA3-209ENST00000580646 MS4A8Q9BY19 250 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TRIM55Q9BYV6 548 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 WDR54Q9H977 334 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 BRF2Q9HAW0 419 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 ZNF304Q9HCX3 659 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 DHCR7Q9UBM7 475 aaKnown RBP9.37□□□□□ -0.91
GGA3-209ENST00000580646 ANAPC2Q9UJX6 822 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 ZNF225Q9UK10 706 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 SNX6Q9UNH7 406 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 TP53TG5Q9Y2B4 290 aa9.37□□□□□ -0.91
GGA3-209ENST00000580646 BOD1L1Q8NFC6 3051 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 A0A088AWK7 358 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 TMEM120BA0PK00 339 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ARGFXA6NJG6 315 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 K7EM74 188 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 PPP6CO00743 305 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 FOXS1O43638 330 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 GALR3O60755 368 aaPredicted RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 DNAJB5O75953 348 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 SEMA3DO95025 777 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 SCELO95171 688 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 MED26O95402 600 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 KRT6AP02538 564 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 KRT6BP04259 564 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CYC1P08574 325 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 NR1D1P20393 614 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ITGAXP20702 1163 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ZNF10P21506 573 aaPredicted RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 IL10P22301 178 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ALAS2P22557 587 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 GRK2P25098 689 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 PTX3P26022 381 aaPredicted RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 KRT6CP48668 564 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CCL11P51671 97 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 KCNC4Q03721 635 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 IFT88Q13099 833 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CHAF1BQ13112 559 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 MPP2Q14168 576 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 RCN2Q14257 317 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ZRSR2Q15696 482 aaKnown RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 CPSF6Q16630 551 aaKnown RBP eCLIP9.36□□□□□ -0.91
GGA3-209ENST00000580646 TTMPQ5BVD1 217 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 DEPDC1Q5TB30 811 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CPZQ66K79 652 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 TRIM40Q6P9F5 258 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ASB18Q6ZVZ8 466 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CHSY3Q70JA7 882 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 RPS27LQ71UM5 84 aaKnown RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 OVCH1Q7RTY7 1134 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 NUDCD3Q8IVD9 361 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 KIRREL3Q8IZU9 778 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CCNYL1Q8N7R7 359 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 OR2L5Q8NG80 312 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 HUS1BQ8NHY5 278 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 RAB3IL1Q8TBN0 382 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 UTP15Q8TED0 518 aaKnown RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 NACC2Q96BF6 587 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ARL8AQ96BM9 186 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 MS4A6EQ96DS6 147 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 MOCOSQ96EN8 888 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 CDK15Q96Q40 435 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 NPLQ9BXD5 320 aaPredicted RBP9.36□□□□□ -0.91
GGA3-209ENST00000580646 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
GGA3-209ENST00000580646 ROGDIQ9GZN7 287 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms