RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PRDM7Q9NQW5 492 aa17.66■□□□□ 0.42
PRKCA-203ENST00000578063 SLAMF8Q9P0V8 285 aa17.66■□□□□ 0.42
PRKCA-203ENST00000578063 EXO1Q9UQ84 846 aaKnown RBP17.66■□□□□ 0.42
PRKCA-203ENST00000578063 A0A096LPI6 279 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 SLC9B1P1A6NJY1 282 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 C4orf51C9J302 202 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 P2RX6O15547 441 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 TMPRSS11DO60235 418 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 MGRN1O60291 552 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 PRAMEF10O60809 474 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 GUCY1B2O75343 617 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 LAMP1P11279 417 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 DDCP20711 480 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 ME2P23368 584 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 ATP5A1P25705 553 aaKnown RBP17.65■□□□□ 0.42
PRKCA-203ENST00000578063 MPLP40238 635 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 GFERP55789 205 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 SLC9A5Q14940 896 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 C1orf146Q5VVC0 180 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 ABHD13Q7L211 337 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 PLXDC1Q8IUK5 500 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 KCT2Q8NC54 265 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 NCSTNQ92542 709 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 TM4SF18Q96CE8 201 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 ZNF764Q96H86 408 aaPredicted RBP17.65■□□□□ 0.42
PRKCA-203ENST00000578063 CGREF1Q99674 301 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 ZMYND15Q9H091 742 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 SERHLQ9NQF3 203 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 SH3BP4Q9P0V3 963 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 L3MBTL1Q9Y468 752 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 KMT2EQ8IZD2 1858 aa17.65■□□□□ 0.42
PRKCA-203ENST00000578063 LOC105369274A0A096LPK9 316 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 A0A0G2JN53 185 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 LOC102723532A0A0G2JNH3 316 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 TNFRSF10AO00220 468 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 PCDHGA12O60330 932 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 TBX19O60806 448 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 ZNF10P21506 573 aaPredicted RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 TRPC1P48995 793 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 WNT3P56703 355 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 RIPK1Q13546 671 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 SUZ12Q15022 739 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 LRIF1Q5T3J3 769 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 NKAIN2Q5VXU1 208 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 ANKRD26P1Q6NSI1 321 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 SLC15A3Q8IY34 581 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 KIAA2013Q8IYS2 634 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 OR4N4Q8N0Y3 316 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 CSNK1A1LQ8N752 337 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 EFCAB3Q8N7B9 438 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 ACOT4Q8N9L9 421 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 OR8J3Q8NGG0 315 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 OR8K5Q8NH50 307 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 DNAJB14Q8TBM8 379 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 UTP15Q8TED0 518 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 CCDC74AQ96AQ1 378 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 GMEB2Q9UKD1 530 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 RAB23Q9ULC3 237 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 BTBD3Q9Y2F9 522 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 PCDHA9Q9Y5H5 950 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 PCDH15Q96QU1 1955 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 PRSS51A0A1B0GVH4 220 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 TXNDC9O14530 226 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 RFXANKO14593 260 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 SIGLEC6O43699 453 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 SCN2BO60939 215 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 FAM58BPP0C7Q3 252 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 ZNF888P0CJ79 500 aaPredicted RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 RAB8AP61006 207 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 MC1RQ01726 317 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 KPNB1Q14974 876 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 NANOGP8Q6NSW7 305 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 ZC3H14Q6PJT7 736 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 ANKRD46Q86W74 232 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 NATD1Q8N6N6 113 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 WDR60Q8WVS4 1066 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 TMEM125Q96AQ2 219 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 CCDC115Q96NT0 180 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 FAIM2Q9BWQ8 316 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 PAIP1Q9H074 479 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 NANOGQ9H9S0 305 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 FAM60AQ9NP50 221 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 LYARQ9NX58 379 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 SUCOQ9UBS9 1254 aaKnown RBP17.64■□□□□ 0.41
PRKCA-203ENST00000578063 BTNL2Q9UIR0 455 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 POMPQ9Y244 141 aa17.64■□□□□ 0.41
PRKCA-203ENST00000578063 PI4KAP42356 2102 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 MN1Q10571 1320 aaPredicted RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 RNASET2O00584 256 aaKnown RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 NME4O00746 187 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 MAP3K7O43318 606 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 B4GAT1O43505 415 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 SRPX2O60687 465 aaPredicted RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 ZBTB11O95625 1053 aaPredicted RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 C9P02748 559 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 EIF2S1P05198 315 aaKnown RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 SMIM10L1P0DMW3 83 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 DRD2P14416 443 aa17.63■□□□□ 0.41
PRKCA-203ENST00000578063 MLLT3P42568 568 aaPredicted RBP17.63■□□□□ 0.41
PRKCA-203ENST00000578063 ACTR3P61158 418 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms