RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC16A5O15375 505 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 HCN1O60741 890 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 MYO1DO94832 1006 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 GLSO94925 669 aaPredicted RBP8.37□□□□□ -1.07
SMG6-218ENST00000575454 GOSR1O95249 250 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 SERPIND1P05546 499 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 C8GP07360 202 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 CDH1P12830 882 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 MAOAP21397 527 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 CNR1P21554 472 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 MGAT1P26572 445 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 UQCRC1P31930 480 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 RPL22P35268 128 aaKnown RBP8.37□□□□□ -1.07
SMG6-218ENST00000575454 AHRP35869 848 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 RGS4P49798 205 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 BTG2P78543 158 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 BASP1P80723 227 aaKnown RBP8.37□□□□□ -1.07
SMG6-218ENST00000575454 SP140Q13342 867 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 NAE1Q13564 534 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 THOC5Q13769 683 aaKnown RBP8.37□□□□□ -1.07
SMG6-218ENST00000575454 SLC10A1Q14973 349 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 HSPB2Q16082 182 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 FLYWCH1Q4VC44 716 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 C1orf185Q5T7R7 199 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 SEL1L2Q5TEA6 688 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 HECTD2Q5U5R9 776 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 UGT3A1Q6NUS8 523 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 AGTRAPQ6RW13 159 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 LCTLQ6UWM7 567 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 CES3Q6UWW8 571 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 CLEC9AQ6UXN8 241 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 CENPUQ71F23 418 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 TRILQ7L0X0 811 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 LMNTD2Q8IXW0 634 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 TRPV3Q8NET8 790 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 OR4K1Q8NGD4 311 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 NT5CQ8TCD5 201 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 ASB15Q8WXK1 588 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 SGCZQ96LD1 299 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 PWWP2AQ96N64 755 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 SGPP1Q9BX95 441 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 TTTY12Q9BZ98 90 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 LACRTQ9GZZ8 138 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 IL1RL2Q9HB29 575 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 NEUROD4Q9HD90 331 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 ZFATQ9P243 1243 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 Q9UFV3 132 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 ZFP69BQ9UJL9 534 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 PCDHGB3Q9Y5G1 929 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 FAM215AQ9Y5M1 114 aa8.37□□□□□ -1.07
SMG6-218ENST00000575454 NCOA6Q14686 2063 aaPredicted RBP8.37□□□□□ -1.07
SMG6-218ENST00000575454 TRBC2A0A5B9 178 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 A8MUA0 341 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 CLDN4O14493 209 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 DVL2O14641 736 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 OR2J2O76002 312 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ATE1O95260 518 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 HEXAP06865 529 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ZNF888P0CJ79 500 aaPredicted RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 ETS1P14921 441 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 NPPBP16860 134 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 HOXC12P31275 282 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 OLR1P78380 273 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 KIF5AQ12840 1032 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 CUL1Q13616 776 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 CSHL1Q14406 222 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 HYAL4Q2M3T9 481 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 SHEQ5VZ18 495 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ZNF470Q6ECI4 717 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 CASC4Q6P4E1 433 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 RTL4Q6ZR62 310 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 GSTA5Q7RTV2 222 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 KIF18BQ86Y91 864 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 LIX1LQ8IVB5 337 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 TMEM132CQ8N3T6 1108 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 FBXW8Q8N3Y1 598 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 GIMAP7Q8NHV1 300 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 UTP15Q8TED0 518 aaKnown RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 C1orf54Q8WWF1 131 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ATL1Q8WXF7 558 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 RNASE6Q93091 150 aaKnown RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 NCLNQ969V3 563 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ALKBH8Q96BT7 664 aaKnown RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 SNF8Q96H20 258 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 HES6Q96HZ4 224 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ATG10Q9H0Y0 220 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 LDAHQ9H6V9 325 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 NECTIN3Q9NQS3 549 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 DEPPQ9NTK1 212 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 SYBUQ9NX95 663 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 ALKBH4Q9NXW9 302 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 MYOTQ9UBF9 498 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 MTRF1LQ9UGC7 380 aaKnown RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 PACSIN2Q9UNF0 486 aaPredicted RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 MAD1L1Q9Y6D9 718 aa8.36□□□□□ -1.07
SMG6-218ENST00000575454 PRRC2AP48634 2157 aaKnown RBP8.36□□□□□ -1.07
SMG6-218ENST00000575454 CSPG4Q6UVK1 2322 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms