RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 AICDAQ9GZX7 198 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 RNF32Q9H0A6 362 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 CLK4Q9HAZ1 481 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 NMRAL1Q9HBL8 299 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 MMP25Q9NPA2 562 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 NUDT4Q9NZJ9 180 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 ERRFI1Q9UJM3 462 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 NFU1Q9UMS0 254 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 OSGIN2Q9Y236 505 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 SLC5A6Q9Y289 635 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 SHANK1Q9Y566 2161 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 SCN3AQ9NY46 2000 aa11.93□□□□□ -0.5
NPLOC4-213ENST00000573519 COL12A1Q99715 3063 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 A0A088AWK7 358 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 HMX2A2RU54 273 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 LRIT2A6NDA9 550 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 UBXN8O00124 270 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 E2F3O00716 465 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 B3GALT2O43825 422 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 DDAH2O95865 285 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 ZNF10P21506 573 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 GSTM2P28161 218 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 SLC26A5P58743 744 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 IRF9Q00978 393 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 OC90Q02509 493 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 IRF8Q02556 426 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 SRSF11Q05519 484 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 CHIT1Q13231 466 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 INAQ16352 499 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 HIST2H2ACQ16777 129 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 ZNF766Q5HY98 468 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 PAGE2BQ5JRK9 111 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 HIST2H2AA3Q6FI13 130 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 ADNP2Q6IQ32 1131 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 TRIM40Q6P9F5 258 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 CEP128Q6ZU80 1094 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 RELL1Q8IUW5 271 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 KCTD4Q8WVF5 259 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 NXNL1Q96CM4 212 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 MS4A6EQ96DS6 147 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 TAAR6Q96RI8 345 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 UTP23Q9BRU9 249 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 EFCAB11Q9BUY7 163 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 CD244Q9BZW8 370 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 REXO4Q9GZR2 422 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 EHD1Q9H4M9 534 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 ACSS3Q9H6R3 686 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 NT5DC2Q9H857 520 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 COPS7BQ9H9Q2 264 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 NECTIN3Q9NQS3 549 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 PRDM9Q9NQV7 894 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 IGSF5Q9NSI5 407 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 PLEKHB1Q9UF11 243 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 PTBP2Q9UKA9 531 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 ACOT9Q9Y305 439 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 ASB1Q9Y576 335 aa11.92□□□□□ -0.5
NPLOC4-213ENST00000573519 A0A087X1B8 175 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 GABRR3A8MPY1 467 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 MAN1A2O60476 641 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 PRAMEF4O60810 478 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 KERAO60938 352 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 CLEC3AO75596 197 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 PCNAP12004 261 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 PMP22Q01453 160 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 SLC13A2Q13183 592 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 LAPTM5Q13571 262 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 TUBA3CQ13748 450 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 RUNX2Q13950 521 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 PRAMEF9Q5VWM5 478 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 TUBA3EQ6PEY2 450 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 LRRC70Q7Z2Q7 622 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 VN1R5Q7Z5H4 357 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 KIF2BQ8N4N8 673 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 FAM47BQ8NA70 645 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 OR2L5Q8NG80 312 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 SIGLEC12Q96PQ1 595 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 F2RL3Q96RI0 385 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 SLX1AQ9BQ83 275 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 PITHD1Q9GZP4 211 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 TSPYL1Q9H0U9 437 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 CDCP1Q9H5V8 836 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 KLHL1Q9NR64 748 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 SNX15Q9NRS6 342 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 OPTCQ9UBM4 332 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 ZNF490Q9ULM2 529 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 DOCK10Q96BY6 2186 aa11.91□□□□□ -0.5
NPLOC4-213ENST00000573519 TCRBV16S1A1N1A0A5B0 115 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 SAGE2PA6NJ88 616 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 SYCE1LA8MT33 242 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 LRRTM2O43300 516 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 SH3BGRLO75368 114 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 C2P06681 752 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 CD22P20273 847 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 CERS1P27544 350 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms