RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ZIM2Q9NZV7 527 aa14.65□□□□□ -0.06
HERPUD1-219ENST00000570273 SLC22A7Q9Y694 548 aa14.65□□□□□ -0.06
HERPUD1-219ENST00000570273 MDC1Q14676 2089 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 A0A0A6YYD5 115 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 SPAARA0A1B0GVQ0 90 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 HYKKA2RU49 373 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 FITM1A5D6W6 292 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 EFCAB7A8K855 629 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 TMPRSS11DO60235 418 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 SCELO95171 688 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 CSRP1P21291 193 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 TSFMP43897 325 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 ASMTP46597 345 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 MTTPP55157 894 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 CLDN6P56747 220 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 UFM1P61960 85 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 SNRPNP63162 240 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 GARNL3Q5VVW2 1013 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM91A1Q658Y4 838 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 DHRS13Q6UX07 377 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 RIPOR1Q6ZS17 1223 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 TREML1Q86YW5 311 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 ZCCHC7Q8N3Z6 543 aaKnown RBP14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 ACOT4Q8N9L9 421 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 OR9I1Q8NGQ6 314 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 C16orf78Q8WTQ4 265 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 OR6C1Q96RD1 312 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 ZBTB18Q99592 522 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 STRADBQ9C0K7 418 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 ANKHQ9HCJ1 492 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 PRDM7Q9NQW5 492 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 AKAP7Q9P0M2 348 aaPredicted RBP14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 SERTAD3Q9UJW9 196 aa14.64□□□□□ -0.07
HERPUD1-219ENST00000570273 ADAMTS20P59510 1910 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 ZNF860A6NHJ4 632 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 C9JVG2 144 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 TMX2-CTNND1H3BSU7 103 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 AKAP10O43572 662 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 HYAL3O43820 417 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 B3GALT2O43825 422 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 SLC22A3O75751 556 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 KLHL18O94889 574 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 LRATO95237 230 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 MT-CO3P00414 261 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 FTH1P19P0C7X4 201 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 SMIM10L1P0DMW3 83 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 CDK4P11802 303 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 PCSK2P16519 638 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 JAK1P23458 1154 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 ADSLP30566 484 aaPredicted RBP14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 HPCAL1P37235 193 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 TAS2R50P59544 299 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 MUM1Q2TAK8 710 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 CDCP2Q5VXM1 449 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 TLDC1Q6P9B6 456 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 GK5Q6ZS86 529 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 PRSS41Q7RTY9 318 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 ARHGEF39Q8N4T4 335 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 KRTCAP2Q8N6L1 136 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 AMER3Q8N944 861 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 GFM2Q969S9 779 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 SMIM10Q96HG1 83 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 DEPDC7Q96QD5 511 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 SERINC2Q96SA4 455 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 ACTL8Q9H568 366 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 MYNNQ9NPC7 610 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 CUTCQ9NTM9 273 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 OCIAD1Q9NX40 245 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 LYARQ9NX58 379 aaKnown RBP14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 RARRES3Q9UL19 164 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 NAALAD2Q9Y3Q0 740 aa14.63□□□□□ -0.07
HERPUD1-219ENST00000570273 CAPN14A8MX76 684 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 H3BMH7 237 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 NR5A2O00482 541 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 ANKRD28O15084 1053 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 GALR3O60755 368 aaPredicted RBP14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 CSO75390 466 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 UBOX5O94941 541 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 MED26O95402 600 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 IL3P08700 152 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM58BPP0C7Q3 252 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 CLNS1AP54105 237 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 EMP3P54852 163 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 CLDN8P56748 225 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 TRA2BP62995 288 aaKnown RBP14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 SKP1P63208 163 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 SIM1P81133 766 aaPredicted RBP14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 SLC9A5Q14940 896 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 KRT72Q14CN4 511 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 MAPRE2Q15555 327 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 HES3Q5TGS1 186 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 CYB5D1Q6P9G0 228 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 C6orf89Q6UWU4 347 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 IKBIPQ70UQ0 350 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 SLCO6A1Q86UG4 719 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 PDSS2Q86YH6 399 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 TMEM132CQ8N3T6 1108 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 EFCAB3Q8N7B9 438 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 OR9A4Q8NGU2 314 aa14.62□□□□□ -0.07
HERPUD1-219ENST00000570273 EGLN2Q96KS0 407 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms