RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 RPP38P78345 283 aaKnown RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 HIST2H2ACQ16777 129 aaPredicted RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 UAP1L1Q3KQV9 507 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 HIST2H2AA3Q6FI13 130 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 DUS1LQ6P1R4 473 aaKnown RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 FAM83HQ6ZRV2 1179 aaPredicted RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 CBLL1Q75N03 491 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 EIF3MQ7L2H7 374 aaKnown RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 HMGN2P46Q86SG4 172 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 FAM20CQ8IXL6 584 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 SLC15A4Q8N697 577 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 OR56A3Q8NH54 315 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 GOT1L1Q8NHS2 421 aaPredicted RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 PPCDCQ96CD2 204 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 DTD2Q96FN9 168 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 C19orf43Q9BQ61 176 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 REPIN1Q9BWE0 567 aaKnown RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 MIEF1Q9NQG6 463 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 PSME2Q9UL46 239 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 RAB23Q9ULC3 237 aa8.4□□□□□ -1.07
LINC00558-201ENST00000569422 EXO1Q9UQ84 846 aaKnown RBP8.4□□□□□ -1.07
LINC00558-201ENST00000569422 GRXCR1A8MXD5 290 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 MT-ND2P03891 347 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 EPHX1P07099 455 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 IL3P08700 152 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 UBL4AP11441 157 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 FPR1P21462 350 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 PRPH2P23942 346 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 POU1F1P28069 291 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 PSMB5P28074 263 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 HAAOP46952 286 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 CRYBA2P53672 197 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 DCDC1P59894 354 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 B2MP61769 119 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SPIBQ01892 262 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TAP2Q03519 686 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 CNTN1Q12860 1018 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 DMC1Q14565 340 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SYT16Q17RD7 645 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TTC23LQ6PF05 361 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RNF165Q6ZSG1 346 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 GALNT13Q8IUC8 556 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 ZFP90Q8TF47 636 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 CHTF18Q8WVB6 975 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SMG7Q92540 1137 aaKnown RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 OTUB1Q96FW1 271 aaPredicted RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 MAGED4Q96JG8 741 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RDH12Q96NR8 316 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 FEVQ99581 238 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 OSGEPL1Q9H4B0 414 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RAD21L1Q9H4I0 556 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TBC1D23Q9NUY8 699 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RLIMQ9NVW2 624 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SCN3BQ9NY72 215 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SELENONQ9NZV5 590 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SPTBN5Q9NRC6 3674 aaKnown RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 CHD9Q3L8U1 2897 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF99A8MXY4 864 aaPredicted RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TNFRSF11BO00300 401 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 QSOX1O00391 747 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 UGT2B11O75310 529 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 PCDH8O95206 1070 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SOD1P00441 154 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 C1GALT1C1LP0DN25 315 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 HOXA9P31269 272 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 ASMTP46597 345 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF763Q0D2J5 394 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 CAMK2GQ13555 558 aaPredicted RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 KCNC3Q14003 757 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TNFAIP8L2Q6P589 184 aaPredicted RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 P3H2Q8IVL5 708 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 ZNF547Q8IVP9 402 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 ALDH16A1Q8IZ83 802 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 C11orf65Q8NCR3 313 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 OR9A1PQ8NGU1 263 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 SLC5A11Q8WWX8 675 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 RPL3LQ92901 407 aaKnown RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 GTPBP3Q969Y2 492 aaKnown RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 IL23AQ9NPF7 189 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 CCDC177Q9NQR7 707 aaPredicted RBP8.39□□□□□ -1.07
LINC00558-201ENST00000569422 GPATCH2Q9NW75 528 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 DEC1Q9P2X7 70 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TAC3Q9UHF0 121 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 TANC1Q9C0D5 1861 aa8.39□□□□□ -1.07
LINC00558-201ENST00000569422 HEPACAM2A8MVW5 462 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 UGDHO60701 494 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 EFCAB14O75071 495 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 LCKP06239 509 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 CISD3P0C7P0 127 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 ADRB3P13945 408 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 MAGEA2P43356 314 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 TMBIM6P55061 237 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 NPRL3Q12980 569 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 NR1D2Q14995 579 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 SLC5A12Q1EHB4 618 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 PRSS53Q2L4Q9 553 aa8.38□□□□□ -1.07
LINC00558-201ENST00000569422 RFX4Q33E94 735 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms