RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ARL13AQ5H913 290 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-217ENST00000569263 DEPDC1Q5TB30 811 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 TRIM42Q8IWZ5 723 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 AMER3Q8N944 861 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 OR51Q1Q8NH59 317 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 AGR3Q8TD06 166 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 DYDC1Q8WWB3 177 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 STARD8Q92502 1023 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 RGMAQ96B86 450 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 MIEF2Q96C03 454 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 SMIM10Q96HG1 83 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 SLC45A3Q96JT2 553 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 HBEGFQ99075 208 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 TBCDQ9BTW9 1192 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 WDR54Q9H977 334 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 BRF2Q9HAW0 419 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 SLC22A11Q9NSA0 550 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 FARSBQ9NSD9 589 aaKnown RBP12.37□□□□□ -0.43
CNOT1-217ENST00000569263 NMRK1Q9NWW6 199 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 IL17BQ9UHF5 180 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 NXT1Q9UKK6 140 aaKnown RBP12.37□□□□□ -0.43
CNOT1-217ENST00000569263 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 SLC12A4Q9UP95 1085 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 PTRH2Q9Y3E5 179 aaKnown RBP12.37□□□□□ -0.43
CNOT1-217ENST00000569263 PCDHGA6Q9Y5G7 932 aa12.37□□□□□ -0.43
CNOT1-217ENST00000569263 MRPS18BQ9Y676 258 aaKnown RBP12.37□□□□□ -0.43
CNOT1-217ENST00000569263 FREM2Q5SZK8 3169 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SEC16AO15027 2179 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 ZNF891A8MT65 544 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 RTCAO00442 366 aaKnown RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SEMA3DO95025 777 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 HSD3B1P14060 373 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 HSD3B2P26439 372 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 CERS1P27544 350 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SERPINB3P29508 390 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 XCR1P46094 333 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 HTR6P50406 440 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 MC1RQ01726 317 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 STX3Q13277 289 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 CUL3Q13618 768 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 NKG7Q16617 165 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 IMPG1Q17R60 797 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 MFSD4BQ5TF39 518 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 FAM219BQ5XKK7 198 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 CLEC6AQ6EIG7 209 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 MRPL14Q6P1L8 145 aaKnown RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 HOMEZQ8IX15 550 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 PRSS58Q8IYP2 241 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 OR5T3Q8NGG3 340 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SERINC2Q96SA4 455 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SLC26A1Q9H2B4 701 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SOX17Q9H6I2 414 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 C14orf105Q9NVL8 296 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 AHSPQ9NZD4 102 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
CNOT1-217ENST00000569263 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
CNOT1-217ENST00000569263 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 PLPP1O14494 284 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 EFSO43281 561 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 CHST10O43529 356 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 CNOT3O75175 753 aaKnown RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 LYPLA1O75608 230 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 CREG1O75629 220 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 SNUPNO95149 360 aaKnown RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ETHE1O95571 254 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ZGLP1P0C6A0 271 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 RNH1P13489 461 aaKnown RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 CHN1P15882 459 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 NR1D1P20393 614 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 HIST1H1TP22492 207 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 TSFMP43897 325 aaKnown RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 SLC1A6P48664 564 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ARFIP1P53367 373 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ABRAXAS2Q15018 415 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 VWA2Q5GFL6 755 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 KANK2Q63ZY3 851 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ATG16L1Q676U5 607 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 OR4C11Q6IEV9 310 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 SCIMPQ6UWF3 145 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 SHISA6Q6ZSJ9 500 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 NUDT13Q86X67 352 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 ZC3H7AQ8IWR0 971 aaKnown RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 GBP7Q8N8V2 638 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-217ENST00000569263 OR2Y1Q8NGV0 311 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 OR6Y1Q8NGX8 325 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 RAB3IL1Q8TBN0 382 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 STT3BQ8TCJ2 826 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 PEX11GQ96HA9 241 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 QRFPRQ96P65 431 aa12.35□□□□□ -0.43
CNOT1-217ENST00000569263 SPSB2Q99619 263 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms