RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 TAC4Q86UU9 113 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 P3H2Q8IVL5 708 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF683Q8IZ20 524 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GHDCQ8N2G8 530 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 RYBPQ8N488 228 aaPredicted RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TTC9BQ8N6N2 239 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 OR4C15Q8NGM1 316 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ARRDC2Q8TBH0 407 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GIMAP1Q8WWP7 306 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 WBP1Q96G27 269 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MYO19Q96H55 970 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 IGSF21Q96ID5 467 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TBATAQ96M53 351 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 MGLLQ99685 303 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 TBCDQ9BTW9 1192 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 SPNS1Q9H2V7 528 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 NDFIP2Q9NV92 336 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 THUMPD1Q9NXG2 353 aaKnown RBP5.24□□□□□ -1.57
LINC01541-202ENST00000568095 GPR83Q9NYM4 423 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 IL20Q9NYY1 176 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 VPS4AQ9UN37 437 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 KCTD3Q9Y597 815 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 ALG5Q9Y673 324 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 U3KQ87 197 aa5.24□□□□□ -1.57
LINC01541-202ENST00000568095 NPEPPSL1A6NEC2 478 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 OR6C75A6NL08 312 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 CCL22O00626 93 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ADAM12O43184 909 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 IGLV3-27P01718 113 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 CAPN1P07384 714 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HOXD4P09016 255 aaPredicted RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 MSL3P1P0C860 447 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 GLULP15104 373 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ATF6P18850 670 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HMGCLP35914 325 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 B2MP61769 119 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HOXC5Q00444 222 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 RGS1Q08116 209 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ST3GAL4Q11206 333 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 EIF2B5Q13144 721 aaKnown RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 GPR17Q13304 367 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 PTGR1Q14914 329 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 LARS2Q15031 903 aaKnown RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 TATDN3Q17R31 274 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 FAM214AQ32MH5 1076 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF628Q5EBL2 1059 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 TMEM240Q5SV17 173 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 GCNT7Q6ZNI0 430 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ZZZ3Q8IYH5 903 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 CLDN22Q8N7P3 220 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 EFHBQ8N7U6 833 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 LRRC20Q8TCA0 184 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 CREB3L4Q8TEY5 395 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 C2orf15Q8WU43 125 aaKnown RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ELMO1Q92556 727 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SLC25A46Q96AG3 418 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ULK4Q96C45 1275 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HYLS1Q96M11 299 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 OR5M11Q96RB7 305 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ZBTB18Q99592 522 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 KCNJ15Q99712 375 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HTATIP2Q9BUP3 242 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 C2orf49Q9BVC5 232 aaPredicted RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ASPNQ9BXN1 380 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 CATSPERBQ9H7T0 1116 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SP110Q9HB58 689 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SLC25A19Q9HC21 320 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 TAS2R13Q9NYV9 303 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 NUDT4Q9NZJ9 180 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 EIF2B4Q9UI10 523 aaKnown RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 RPS6KA6Q9UK32 745 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF490Q9ULM2 529 aaPredicted RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 STUB1Q9UNE7 303 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 MAPRE3Q9UPY8 281 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SCML2Q9UQR0 700 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 PADI2Q9Y2J8 665 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 MUC22E2RYF6 1773 aaPredicted RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ZNF106Q9H2Y7 1883 aaKnown RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 RPS10-NUDT3A0A1W2PQS6 291 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HYKKA2RU49 373 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 NPIPB8E9PQR5 432 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HCN1O60741 890 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SLC43A1O75387 559 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 TSPAN9O75954 239 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 PDE9AO76083 593 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 WDR47O94967 919 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SOD2P04179 222 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 ICAM2P13598 275 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 HK1P19367 917 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 EN2P19622 333 aaPredicted RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 PTBP1P26599 531 aaKnown RBP eCLIP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 PBX3P40426 434 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 OR1G1P47890 313 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 CRYBA2P53672 197 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 RRAS2P62070 204 aaPredicted RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SMARCB1Q12824 385 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 TSTQ16762 297 aaKnown RBP5.23□□□□□ -1.57
LINC01541-202ENST00000568095 PTCHD3Q3KNS1 767 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 IL27RAQ6UWB1 636 aa5.23□□□□□ -1.57
LINC01541-202ENST00000568095 SUSD1Q6UWL2 747 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms