RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-206	ENST00000564934	HYOU1	Q9Y4L1	999 aa		12	□□□□□ -0.49
RPAP1-206	ENST00000564934	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12	□□□□□ -0.49
RPAP1-206	ENST00000564934	ROS1	P08922	2347 aa		12	□□□□□ -0.49
RPAP1-206	ENST00000564934	EML6	Q6ZMW3	1958 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	KCNE1B	A0A087WTH5	132 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	IGKV3D-11	A0A0A0MRZ8	115 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	AHRR	A9YTQ3	701 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	MYO1C	O00159	1063 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	SMAP	O00193	183 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	PRMT5	O14744	637 aa	Predicted RBP	11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	CHST10	O43529	356 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	SPRY1	O43609	319 aa	Predicted RBP	11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	SOX30	O94993	753 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	MATN4	O95460	622 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	CTSS	P25774	331 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	OPRM1	P35372	400 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	CYLC1	P35663	651 aa	Predicted RBP	11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	ADAR	P55265	1226 aa	Known RBP	11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	ARHGAP19	Q14CB8	494 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	RTL4	Q6ZR62	310 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	LRRC8A	Q8IWT6	810 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	SREK1	Q8WXA9	508 aa	Known RBP	11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	NCLN	Q969V3	563 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	VMP1	Q96GC9	406 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	SCYL1	Q96KG9	808 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	PANX3	Q96QZ0	392 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	RASL10B	Q96S79	203 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	PKP4	Q99569	1192 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	CCDC77	Q9BR77	488 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	KCNF1	Q9H3M0	494 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	NECTIN3	Q9NQS3	549 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	SLC2A6	Q9UGQ3	507 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	TESMIN	Q9Y4I5	508 aa		11.99	□□□□□ -0.49
RPAP1-206	ENST00000564934	hCG_1818297	A0A087WSY0	165 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	DEFB108A	A8MXU0	73 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934		E7ENX8	843 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SLC16A8	O95907	504 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	TPM1	P09493	284 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	CPA2	P48052	419 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SRSF2	Q01130	221 aa	Known RBP	11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	TAP2	Q03519	686 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	VEZF1	Q14119	521 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	THEMIS2	Q5TEJ8	643 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	ZNF534	Q76KX8	674 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	LUZP2	Q86TE4	346 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	ASPG	Q86U10	573 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SLC26A11	Q86WA9	606 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	NEIL3	Q8TAT5	605 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	TM4SF19	Q96DZ7	209 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	PIK3IP1	Q96FE7	263 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	PPP1R2P1	Q96PQ5	205 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	FERMT1	Q9BQL6	677 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SACM1L	Q9NTJ5	587 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SAMD15	Q9P1V8	674 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	MYOT	Q9UBF9	498 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	SLC22A7	Q9Y694	548 aa		11.98	□□□□□ -0.49
RPAP1-206	ENST00000564934	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	ZNF839	A8K0R7	811 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934		A8MV72	311 aa	Predicted RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	KIF2A	O00139	706 aa	Predicted RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	WWP2	O00308	870 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	KPNA5	O15131	536 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	GALR3	O60755	368 aa	Predicted RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	ERN1	O75460	977 aa	Known RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	ZFAND5	O76080	213 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	STK10	O94804	968 aa	Known RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	B3GALT4	O96024	378 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934		P04436	131 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	RFPL3S	P0C7P2	107 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	CCL3	P10147	92 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	PAX1	P15863	534 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	CTNNA2	P26232	953 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	PPARG	P37231	505 aa	Predicted RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	COIL	P38432	576 aa	Predicted RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	TRPC1	P48995	793 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	ATP5J2	P56134	94 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	HERC3	Q15034	1050 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	DEFB134	Q4QY38	66 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	FASTKD1	Q53R41	847 aa	Known RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	NSUN5P2	Q63ZY6	315 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	LIX1	Q8N485	282 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	GOLM1	Q8NBJ4	401 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	OR4L1	Q8NH43	312 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	SLC35G2	Q8TBE7	412 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	ZNF480	Q8WV37	535 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	SLC13A3	Q8WWT9	602 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	THAP11	Q96EK4	314 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	PIGQ	Q9BRB3	760 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	PLA2G12A	Q9BZM1	189 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	PRDM9	Q9NQV7	894 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	PNO1	Q9NRX1	252 aa	Known RBP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	FAM114A2	Q9NRY5	505 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	TMEM184C	Q9NVA4	438 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	NDRG3	Q9UGV2	375 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	ATG4B	Q9Y4P1	393 aa		11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
RPAP1-206	ENST00000564934	CR1	P17927	2039 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms