RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 POGLUT1Q8NBL1 392 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 OR2L8Q8NGY9 312 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 ASZ1Q8WWH4 475 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 KCNJ9Q92806 393 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 MVB12AQ96EY5 273 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 CYTH2Q99418 400 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 CPNE1Q99829 537 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 AARSD1Q9BTE6 412 aaKnown RBP14.92□□□□□ -0.02
RNF40-205ENST00000563909 FUT8Q9BYC5 575 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 PARD6BQ9BYG5 372 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 TXLNGYQ9BZA5 131 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 SLC17A6Q9P2U8 582 aa14.92□□□□□ -0.02
RNF40-205ENST00000563909 A0A087WUV0 522 aaPredicted RBP14.91□□□□□ -0.02
RNF40-205ENST00000563909 CXorf49A8MYA2 514 aaPredicted RBP14.91□□□□□ -0.02
RNF40-205ENST00000563909 NIPSNAP2O75323 286 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 VPS26AO75436 327 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 C1QAP02745 245 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 F7P08709 466 aaPredicted RBP14.91□□□□□ -0.02
RNF40-205ENST00000563909 AOAHP28039 575 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 ZFP36L2P47974 494 aaKnown RBP14.91□□□□□ -0.02
RNF40-205ENST00000563909 MFSD4BQ5TF39 518 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 SHEQ5VZ18 495 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 FBXW10Q5XX13 1052 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 UGT3A1Q6NUS8 523 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 ARHGAP11AQ6P4F7 1023 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 ZNF549Q6P9A3 640 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 OTOAQ7RTW8 1153 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 VRK3Q8IV63 474 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 LIX1LQ8IVB5 337 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 PPM1NQ8N819 430 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 LKAAEAR1Q8TD35 194 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 MIPEPQ99797 713 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 VN1R1Q9GZP7 353 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 KLHL42Q9P2K6 505 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 SLC39A10Q9ULF5 831 aa14.91□□□□□ -0.02
RNF40-205ENST00000563909 H0YGG7 62 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 H7C1Q1 480 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 SMAD7O15105 426 aaKnown RBP14.9□□□□□ -0.02
RNF40-205ENST00000563909 GPC4O75487 556 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 FKBP9O95302 570 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 ABHD2P08910 425 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 GP5P40197 560 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 EMP3P54852 163 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 ARF3P61204 181 aaPredicted RBP14.9□□□□□ -0.02
RNF40-205ENST00000563909 MAT1AQ00266 395 aaKnown RBP14.9□□□□□ -0.02
RNF40-205ENST00000563909 PCBP2Q15366 365 aaKnown RBP eCLIP14.9□□□□□ -0.02
RNF40-205ENST00000563909 KLHL38Q2WGJ6 581 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 GRTP1Q5TC63 336 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 FAM45BPQ6NSW5 357 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 RNF44Q7L0R7 432 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 ZC3HC1Q86WB0 502 aaKnown RBP14.9□□□□□ -0.02
RNF40-205ENST00000563909 PHC2Q8IXK0 858 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 GPATCH11Q8N954 259 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 M1APQ8TC57 530 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 FAM45AQ8TCE6 357 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 RHOJQ9H4E5 214 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 CDCP1Q9H5V8 836 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 ACSS3Q9H6R3 686 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 MMP25Q9NPA2 562 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 TAS2R13Q9NYV9 303 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 C19orf25Q9UFG5 118 aaPredicted RBP14.9□□□□□ -0.02
RNF40-205ENST00000563909 RAB21Q9UL25 225 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 CBLCQ9ULV8 474 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 PSAT1Q9Y617 370 aa14.9□□□□□ -0.02
RNF40-205ENST00000563909 A0A0A6YYC8 382 aaPredicted RBP14.89□□□□□ -0.03
RNF40-205ENST00000563909 I3L1I5 382 aaPredicted RBP14.89□□□□□ -0.03
RNF40-205ENST00000563909 RIPK2O43353 540 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 PIAS1O75925 651 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 PSMB5P28074 263 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 UQCRC1P31930 480 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 SPRP35270 261 aaPredicted RBP14.89□□□□□ -0.03
RNF40-205ENST00000563909 SKIV2L2P42285 1042 aaKnown RBP14.89□□□□□ -0.03
RNF40-205ENST00000563909 CLCN7P51798 805 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 DCAF7P61962 342 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 EXT1Q16394 746 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 HKDC1Q2TB90 917 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 TTLL9Q3SXZ7 439 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 MINDY4Q4G0A6 757 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 GXYLT1Q4G148 440 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 RBM20Q5T481 1227 aaKnown RBP14.89□□□□□ -0.03
RNF40-205ENST00000563909 HECTD2Q5U5R9 776 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 FBXO42Q6P3S6 717 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 EMBQ6PCB8 327 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 TTC23LQ6PF05 361 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 PAQR7Q86WK9 346 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 SIMC1Q8NDZ2 872 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 FAM222BQ8WU58 562 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 TMEM125Q96AQ2 219 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 NDNQ99608 321 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 RBBP8Q99708 897 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 ZFYVE21Q9BQ24 234 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 RAB11FIP5Q9BXF6 653 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 RUVBL1Q9Y265 456 aaKnown RBP14.89□□□□□ -0.03
RNF40-205ENST00000563909 VWA7Q9Y334 891 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 DHRS7Q9Y394 339 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 KLK4Q9Y5K2 254 aa14.89□□□□□ -0.03
RNF40-205ENST00000563909 PHF3Q92576 2039 aaKnown RBP14.88□□□□□ -0.03
RNF40-205ENST00000563909 A0A0G2JNJ9 132 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 FAM95CA0A1B0GW59 222 aa14.88□□□□□ -0.03
RNF40-205ENST00000563909 OR2W5A6NFC9 320 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms