RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SPIN4Q56A73 249 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 SH2D4BQ5SQS7 431 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 FAAH2Q6GMR7 532 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 INO80CQ6PI98 192 aaPredicted RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 SHISA6Q6ZSJ9 500 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 FRMD7Q6ZUT3 714 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 MED25Q71SY5 747 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 VN1R4Q7Z5H5 301 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 CUZD1Q86UP6 607 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 TMEM102Q8N9M5 508 aaPredicted RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 ANKRD53Q8N9V6 530 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 SLC38A9Q8NBW4 561 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 ZNF473Q8WTR7 871 aaKnown RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 TM9SF4Q92544 642 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 MS4A6EQ96DS6 147 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 RBM18Q96H35 190 aaKnown RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 PTCHD1Q96NR3 888 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 NSUN5Q96P11 429 aaKnown RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 SLC6A16Q9GZN6 736 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 CPNE5Q9HCH3 593 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 DMRT3Q9NQL9 472 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 PRTFDC1Q9NRG1 225 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 INTS9Q9NV88 658 aaKnown RBP10.15□□□□□ -0.78
TPM1-229ENST00000561242 TEKT2Q9UIF3 430 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 FBXW2Q9UKT8 454 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 TSC22D4Q9Y3Q8 395 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 TRAF6Q9Y4K3 522 aa10.15□□□□□ -0.78
TPM1-229ENST00000561242 GOLGA4Q13439 2230 aaKnown RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 NSG1A0A0A6YYJ2 146 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 A0A0G2JN53 185 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 ZNF860A6NHJ4 632 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SLCO1B7G3V0H7 640 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 P2RX6O15547 441 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 HCRTR1O43613 425 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 TYROBPO43914 113 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 OR10H2O60403 315 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 NRP2O60462 931 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 ALOX12BO75342 701 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SEC22BO75396 215 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SEMA3DO95025 777 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 BMP10O95393 424 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 PDYNP01213 254 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 KLK1P06870 262 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 FHP07954 510 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 HIST1H1TP22492 207 aaPredicted RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 MMP11P24347 488 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 ITPKBP27987 946 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SLC1A6P48664 564 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SLC18A1P54219 525 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 RAB38P57729 211 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 OR4D2P58180 307 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 TAS2R50P59544 299 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 ABCE1P61221 599 aaKnown RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 MAT1AQ00266 395 aaKnown RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 MAD2L1Q13257 205 aaPredicted RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 SERTAD2Q14140 314 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 NR6A1Q15406 480 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 NKG7Q16617 165 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 CRTC2Q53ET0 693 aaPredicted RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 VWA2Q5GFL6 755 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 ABHD17CQ6PCB6 329 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 GPR180Q86V85 440 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 CRLF3Q8IUI8 442 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 ZNF595Q8IYB9 648 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 CDC26Q8NHZ8 85 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 RAB3IL1Q8TBN0 382 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 AGR3Q8TD06 166 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 CREB3L4Q8TEY5 395 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 MOCOSQ96EN8 888 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 C10orf90Q96M02 699 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 LPAR4Q99677 370 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 GATA5Q9BWX5 397 aaPredicted RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 MS4A8Q9BY19 250 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SPRY4Q9C004 299 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 SLC26A1Q9H2B4 701 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 MANSC1Q9H8J5 431 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 LYRM4Q9HD34 91 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 IL17BQ9UHF5 180 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 EMCNQ9ULC0 261 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 TIMM22Q9Y584 194 aa10.14□□□□□ -0.79
TPM1-229ENST00000561242 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
TPM1-229ENST00000561242 ARHGEF17Q96PE2 2063 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 ARGFXA6NJG6 315 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 IDSB3KWA1 339 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 NKX2-8O15522 239 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 FOXS1O43638 330 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 VPS4BO75351 444 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 CDC123O75794 336 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 ALOX15P16050 662 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 ITGA3P26006 1051 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 GSTM5P46439 218 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 ALDH9A1P49189 494 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 CCL11P51671 97 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 RPS18P62269 152 aaKnown RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 PPP2R2AP63151 447 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 OLR1P78380 273 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 KLC1Q07866 573 aa10.13□□□□□ -0.79
TPM1-229ENST00000561242 GALNT1Q10472 559 aaPredicted RBP10.13□□□□□ -0.79
TPM1-229ENST00000561242 TRAF3Q13114 568 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms