RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 THUMPD1Q9NXG2 353 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 CFAP97Q9P2B7 532 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 MARCH4Q9P2E8 410 aaPredicted RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 GALPQ9UBC7 116 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 UBA2Q9UBT2 640 aaPredicted RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 EIF2B4Q9UI10 523 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 MRPS17Q9Y2R5 130 aaKnown RBP8.24□□□□□ -1.09
CCDC33-209ENST00000560565 PCDHGA3Q9Y5H0 932 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 N6AMT1Q9Y5N5 214 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 SCN8AQ9UQD0 1980 aa8.24□□□□□ -1.09
CCDC33-209ENST00000560565 ATG2BQ96BY7 2078 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 IQCMA0A1B0GVH7 501 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 B8ZZF3 427 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CACNB4O00305 520 aaPredicted RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CDC7O00311 574 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 FFAR2O15552 330 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 SUV39H1O43463 412 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 UGDHO60701 494 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HCN1O60741 890 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 TBL1XO60907 577 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 KCNK2O95069 426 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PGLSO95336 258 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CLDN9O95484 217 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CRYZL1O95825 349 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 LGI1O95970 557 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 DCNP07585 359 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ABCB1P08183 1280 aaPredicted RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 MMP2P08253 660 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ANXA5P08758 320 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HSD3B1P14060 373 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 GLULP15104 373 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HSD3B2P26439 372 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 KDELR2P33947 212 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 KIR3DL1P43629 444 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 MAPK8P45983 427 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 MAP2K4P45985 399 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ASMTP46597 345 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CLK3P49761 638 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 SEPHS1P49903 392 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HNMTP50135 292 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ARSDP51689 593 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 IST1P53990 364 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PNLIPRP1P54315 467 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 LSM3P62310 102 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 RPS24P62847 133 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 GPR50Q13585 617 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 SIM2Q14190 667 aaPredicted RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 DMC1Q14565 340 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 QPRTQ15274 297 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF77Q15935 545 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 DUOXA1Q1HG43 343 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HSD17B12Q53GQ0 312 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PDZK1Q5T2W1 519 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PTRHD1Q6GMV3 140 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CXorf57Q6NSI4 855 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HSDL2Q6YN16 418 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 BTLAQ7Z6A9 289 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PLPP6Q8IY26 295 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 RBFAQ8N0V3 343 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 OR8H2Q8N162 312 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 LIX1Q8N485 282 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 DNAJC22Q8N4W6 341 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 DCAF4L2Q8NA75 395 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 DTWD2Q8NBA8 298 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 OR4F6Q8NGB9 312 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 OR2T11Q8NH01 316 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 FIBINQ8TAL6 211 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 SH3RF2Q8TEC5 729 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 JPH3Q8WXH2 748 aaPredicted RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 USP7Q93009 1102 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 AP2M1Q96CW1 435 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ZFYVE19Q96K21 471 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 COQ7Q99807 217 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 EGFL8Q99944 293 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CD244Q9BZW8 370 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CLPBQ9H078 707 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PIF1Q9H611 641 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PDFQ9HBH1 243 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 WWOXQ9NZC7 414 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 MARK1Q9P0L2 795 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 GMPR2Q9P2T1 348 aaKnown RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 HECAQ9UBI9 543 aaPredicted RBP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 KLQ9UEF7 1012 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 VPS51Q9UID3 782 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC33-209ENST00000560565 CCL26Q9Y258 94 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 ASB4Q9Y574 426 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PIAS3Q9Y6X2 628 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PMF1-BGLAPU3KQ54 211 aa8.23□□□□□ -1.09
CCDC33-209ENST00000560565 PROB1E7EW31 1015 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 E9PQ18 207 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 INSIG1O15503 277 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 HOXC11O43248 304 aaPredicted RBP8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SCN2BO60939 215 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 GUCY1B2O75343 617 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 IL1AP01583 271 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 SEMG1P04279 462 aa8.22□□□□□ -1.09
CCDC33-209ENST00000560565 ALPPP05187 535 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms