RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TMEM98Q9Y2Y6 226 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 NOTCH4Q99466 2003 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 RTCAO00442 366 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF197O14709 1029 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 GPR37L1O60883 481 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 POP7O75817 140 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 C6P13671 934 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 GGT2P36268 569 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 LIPAP38571 399 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 IDH2P48735 452 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 TEAD4Q15561 434 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 FAM71E1Q6IPT2 247 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 NXPE4Q6UWF7 544 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 P3H2Q8IVL5 708 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 LAS2Q8IYD9 372 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 NLGN4XQ8N0W4 816 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 MRPL43Q8N983 215 aaKnown RBP9.62□□□□□ -0.87
LRRC28-216ENST00000559819 OR52N2Q8NGI0 321 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 POF1BQ8WVV4 589 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 REPS1Q96D71 796 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 ALPK1Q96QP1 1244 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 NECTIN3Q9NQS3 549 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 C1GALT1Q9NS00 363 aa9.62□□□□□ -0.87
LRRC28-216ENST00000559819 FAM227AF5H4B4 570 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 M0R082 166 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PCDH17O14917 1159 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ADH5P11766 374 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 VIPR2P41587 438 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 BCAP31P51572 246 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PNLIPRP1P54315 467 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ST8SIA6P61647 398 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 RPS26P62854 115 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CYP4F2P78329 520 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CDK6Q00534 326 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PDE7AQ13946 482 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 DGUOKQ16854 277 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 BCL7AQ4VC05 210 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 RPS26P11Q5JNZ5 115 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 MFSD4AQ8N468 514 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 OR5AR1Q8NGP9 310 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 GOT1L1Q8NHS2 421 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 UTP15Q8TED0 518 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 EFCAB11Q9BUY7 163 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ZDHHC5Q9C0B5 715 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ABCG4Q9H172 646 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF226Q9NYT6 803 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 DAPK2Q9UIK4 370 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 B3GNT3Q9Y2A9 372 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 SH3GLB1Q9Y371 365 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PCDHGA2Q9Y5H1 932 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PCM1Q15154 2024 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 A0A1W2PRB8 838 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 TMEM247A6NEH6 219 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 SOBPA7XYQ1 873 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 FOXE1O00358 373 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 LZTS3O60299 673 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CTNNB1P35222 781 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 EEF1A2Q05639 463 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 INAQ16352 499 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 HIST2H2ACQ16777 129 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 C1orf53Q5VUE5 145 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 HIST2H2AA3Q6FI13 130 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 METTL4Q8N3J2 472 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ZNF557Q8N988 423 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PLA2G15Q8NCC3 412 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 IPCEF1Q8WWN9 437 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 GGHQ92820 318 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PPP1R14BQ96C90 147 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 LGALS12Q96DT0 336 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 WDR34Q96EX3 536 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 PAWRQ96IZ0 340 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CXorf36Q9H7Y0 433 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 ZBTB20Q9HC78 741 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 HMG20AQ9NP66 347 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CCNB1IP1Q9NPC3 277 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CCDC177Q9NQR7 707 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 GPR83Q9NYM4 423 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CXXC1Q9P0U4 656 aaPredicted RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 C5AR2Q9P296 337 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 RAB23Q9ULC3 237 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 SNX8Q9Y5X2 465 aa9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CFAP20Q9Y6A4 193 aaKnown RBP9.61□□□□□ -0.87
LRRC28-216ENST00000559819 CARNS1A5YM72 827 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 ADAMDEC1O15204 470 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 DPM1O60762 260 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 PAPLNO95428 1278 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 SRPRAP08240 638 aaKnown RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 STSP08842 583 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 GRK5P34947 590 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 KCNC4Q03721 635 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 RELAQ04206 551 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 FCHO2Q0JRZ9 810 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 MICAQ29983 383 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 TRIM16LQ309B1 348 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 FNDC3BQ53EP0 1204 aaKnown RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 SOWAHCQ53LP3 525 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms