RNA–Protein interactions for RNA: ENST00000559557.1

MRPS11-208, Transcript of mitochondrial ribosomal protein S11, human

TSL 3

Gene MRPS11, Length 447 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS11-208	ENST00000559557	MOCS3	O95396	460 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CCR1	P32246	355 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CDH5	P33151	784 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	TTK	P33981	857 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	RDX	P35241	583 aa	Known RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	USP8	P40818	1118 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	PPP1R2	P41236	205 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	GABRB2	P47870	512 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	RXRG	P48443	463 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	KLK7	P49862	253 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SULT1E1	P49888	294 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CRIP2	P52943	208 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	C21orf59	P57076	290 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CLDN2	P57739	230 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	NUCB2	P80303	420 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	ARF5	P84085	180 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	ZBTB17	Q13105	803 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SLC12A1	Q13621	1099 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	E2F5	Q15329	346 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	EXOC3L4	Q17RC7	722 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	DPCR1	Q3MIW9	517 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	AMZ1	Q400G9	498 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CCDC38	Q502W7	563 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SETMAR	Q53H47	684 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	RABGAP1L	Q5R372	815 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	IRAK1BP1	Q5VVH5	260 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	TAF3	Q5VWG9	929 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SEL1L3	Q68CR1	1132 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	PLEKHA7	Q6IQ23	1121 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	C22orf39	Q6P5X5	142 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	GBP6	Q6ZN66	633 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	FAM71A	Q8IYT1	594 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SLC25A45	Q8N413	288 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	METTL27	Q8N6F8	245 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	ZNF557	Q8N988	423 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	WDSUB1	Q8N9V3	476 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	ZNF397	Q8NF99	534 aa	Predicted RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	OR2A12	Q8NGT7	310 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	ARRDC2	Q8TBH0	407 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CREB3L4	Q8TEY5	395 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SLC20A1	Q8WUM9	679 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	OR8D1	Q8WZ84	308 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	TANK	Q92844	425 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	SDCCAG3	Q96C92	435 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CCDC34	Q96HJ3	373 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CFAP57	Q96MR6	1250 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	DDX50	Q9BQ39	737 aa	Known RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	CRB3	Q9BUF7	120 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	TKTL2	Q9H0I9	626 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	GDF3	Q9NR23	364 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	RWDD2A	Q9UIY3	292 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	VPS28	Q9UK41	221 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	POU2F3	Q9UKI9	436 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	GAB2	Q9UQC2	676 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	HS3ST2	Q9Y278	367 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	ITM2B	Q9Y287	266 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	NCKAP1	Q9Y2A7	1128 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	PCDHGA1	Q9Y5H4	931 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	FER1L5	A0AVI2	2057 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	PRRC2C	Q9Y520	2896 aa	Known RBP	4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557	NUP210L	Q5VU65	1888 aa		4.26	□□□□□ -1.73
MRPS11-208	ENST00000559557		A0A0G2JPF8	293 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	HNRNPCL3	B7ZW38	293 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557		E9PAM4	449 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557		F8VZ95	297 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	C16orf97	H3BN30	126 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	GOLGA8S	H3BPF8	625 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	KPNA3	O00505	521 aa	Predicted RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	WNT9B	O14905	357 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	MCF2L	O15068	1137 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	ALOX15B	O15296	676 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	SLC31A1	O15431	190 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	SLC7A4	O43246	635 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	ZIC3	O60481	467 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	HNRNPCL1	O60812	293 aa	Known RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	CLDN11	O75508	207 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	LDOC1	O95751	146 aa	Predicted RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	GNA14	O95837	355 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	RHOC	P08134	193 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	THEGL	P0DJG4	465 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	HNRNPCL4	P0DMR1	293 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	ACP1	P24666	158 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	CHRNA3	P32297	505 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	STX2	P32856	288 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	HNF1B	P35680	557 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	EIF2S3	P41091	472 aa	Known RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	SERPINH1	P50454	418 aa	Known RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	PDX1	P52945	283 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	CDH4	P55283	916 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	SEMG2	Q02383	582 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	SULT2A1	Q06520	285 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	CETN1	Q12798	172 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	DRAP1	Q14919	205 aa	Predicted RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	OASL	Q15646	514 aa	Known RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	TIGD6	Q17RP2	521 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	ZNF542P	Q5EBM4	170 aa		4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.25	□□□□□ -1.73
MRPS11-208	ENST00000559557	LRRC73	Q5JTD7	316 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms