RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MYLK4Q86YV6 388 aaPredicted RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 PRSS58Q8IYP2 241 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 TBC1D19Q8N5T2 526 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 CCNYL1Q8N7R7 359 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 CDYL2Q8N8U2 506 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 OR51Q1Q8NH59 317 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 CCT6BQ92526 530 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 MTFMTQ96DP5 389 aaKnown RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 BBC3Q96PG8 261 aaPredicted RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 FRG2BQ96QU4 278 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 TRIM55Q9BYV6 548 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 SHCBP1LQ9BZQ2 653 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 C20orf27Q9GZN8 174 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 VN1R1Q9GZP7 353 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 REXO4Q9GZR2 422 aaKnown RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 CENPHQ9H3R5 247 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 ZNF395Q9H8N7 513 aaPredicted RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 ANKHQ9HCJ1 492 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 KCMF1Q9P0J7 381 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 TRPC4Q9UBN4 977 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 ZNF282Q9UDV7 671 aaPredicted RBP10.8□□□□□ -0.68
SNX1-204ENST00000559061 PPT2Q9UMR5 302 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 TIMM22Q9Y584 194 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 PCDHGA11Q9Y5H2 935 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 PTGDR2Q9Y5Y4 395 aa10.8□□□□□ -0.68
SNX1-204ENST00000559061 SMG1Q96Q15 3661 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 DOCK10Q96BY6 2186 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 ZFYVE26Q68DK2 2539 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 A0A1W2PQ72 361 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 ANKDD1BA6NHY2 528 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 FOXE1O00358 373 aaPredicted RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 MANBAO00462 879 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 TMPRSS11DO60235 418 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 TRIM13O60858 407 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 ALOX12BO75342 701 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 EEDO75530 441 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 ESRRBO95718 433 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 ATP5A1P25705 553 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 BSGP35613 385 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 XCR1P46094 333 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 AVPR1BP47901 424 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 MAGOHP61326 146 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 STXBP1P61764 594 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 BTN3A2P78410 334 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 GALNT1Q10472 559 aaPredicted RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 TBL3Q12788 808 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 CHAF1BQ13112 559 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 KIRREL2Q6UWL6 708 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 MED25Q71SY5 747 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 ABHD13Q7L211 337 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 GPR155Q7Z3F1 870 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 CCDC63Q8NA47 563 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 EXTL1Q92935 676 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 UBE2E3Q969T4 207 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 CCDC126Q96EE4 140 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 PEX11GQ96HA9 241 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 EFHD1Q9BUP0 239 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 TUBB1Q9H4B7 451 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 MLXIPLQ9NP71 852 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 MKKSQ9NPJ1 570 aaPredicted RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 CDC14AQ9UNH5 594 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 CCL27Q9Y4X3 112 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 KCNMB2Q9Y691 235 aa10.79□□□□□ -0.68
SNX1-204ENST00000559061 TNRC6AQ8NDV7 1962 aaKnown RBP10.79□□□□□ -0.68
SNX1-204ENST00000559061 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 LOC102723996A0A087X1L8 192 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 IGKV3D-11A0A0A0MRZ8 115 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 A0A0A6YYD5 115 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 TMEM120BA0PK00 339 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 IDSB3KWA1 339 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 TMEM233B4DJY2 109 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 CYR61O00622 381 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 ITM2AO43736 263 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 PRKRAO75569 313 aaKnown RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 CDC123O75794 336 aaPredicted RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 DNAJB5O75953 348 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MLYCDO95822 493 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MYZAPP0CAP1 466 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MMP11P24347 488 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 SERPINB1P30740 379 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 OTX2P32243 289 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 FOLR3P41439 243 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 LIM2P55344 173 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 PKNOX1P55347 436 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 HNRNPH2P55795 449 aaKnown RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 BTG2P78543 158 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 Q0VFX4 171 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 CUL3Q13618 768 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 SSPNQ14714 243 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 ABRAXAS2Q15018 415 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 HIST2H2ACQ16777 129 aaPredicted RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 DEFB109BQ30KR1 87 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 UGT3A2Q3SY77 523 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 SGO1Q5FBB7 561 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 CLEC6AQ6EIG7 209 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 HIST2H2AA3Q6FI13 130 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 MRM1Q6IN84 353 aaKnown RBP10.78□□□□□ -0.68
SNX1-204ENST00000559061 TMEM205Q6UW68 189 aa10.78□□□□□ -0.68
SNX1-204ENST00000559061 SCIMPQ6UWF3 145 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms