RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ATRXP46100 2492 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 LOC101059948A0A1B0GTJ6 334 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ZCWPW2A0A1B0GU75 182 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 SLC5A10A0PJK1 596 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 OR6C74A6NCV1 312 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 EFCAB7A8K855 629 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 H7C0S8 307 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 MASP2O00187 686 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CD3EAPO15446 510 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 TTI1O43156 1089 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 KLK10O43240 276 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 PSMD3O43242 534 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 NIPSNAP2O75323 286 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 VAPBO95292 243 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CPNE6O95741 557 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 VIPP01282 170 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 NR2F6P10588 404 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FOLR1P15328 257 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 POLR2CP19387 275 aaPredicted RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 BTF3P20290 206 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 NFKBIAP25963 317 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ACADLP28330 430 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 PEBP1P30086 187 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 FMO4P31512 558 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 AKT1P31749 480 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FDFT1P37268 417 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 LIPAP38571 399 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FASLGP48023 281 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 PTDSS1P48651 473 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 CARSP49589 748 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 PPM1FP49593 454 aaPredicted RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 KPNA2P52292 529 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 ITGA8P53708 1063 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 PRKAG1P54619 331 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 MPP1Q00013 466 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 TLE3Q04726 772 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ACVR1Q04771 509 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CACNG1Q06432 222 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 C2orf54Q08AI8 447 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CDH17Q12864 832 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 DAG1Q14118 895 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 SLC29A2Q14542 456 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FASTKD3Q14CZ7 662 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 ZIC1Q15915 447 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 TBC1D25Q3MII6 688 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ANKRD20A4Q4UJ75 823 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 SOWAHCQ53LP3 525 aaPredicted RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 PCID2Q5JVF3 399 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 COLEC12Q5KU26 742 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CTSL3PQ5NE16 218 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 LDLRAP1Q5SW96 308 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 DEPDC1Q5TB30 811 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ATP1A1-AS1Q5TC04 95 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FCRL6Q6DN72 434 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 LRRC8BQ6P9F7 803 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FAM199XQ6PEV8 388 aaPredicted RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 CNSTQ6PJW8 725 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 SYT10Q6XYQ8 523 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 PPP1R21Q6ZMI0 780 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CYHR1Q6ZMK1 362 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CENPUQ71F23 418 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 TRIM73Q86UV7 250 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 DTX2Q86UW9 622 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 SLC15A3Q8IY34 581 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 RNF152Q8N8N0 203 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CCDC89Q8N998 374 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 SLC38A9Q8NBW4 561 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 OR5AR1Q8NGP9 310 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 OR2L2Q8NH16 312 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 OR4L1Q8NH43 312 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CFAP61Q8NHU2 1237 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 WDR36Q8NI36 951 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 FLVCR1-AS1Q8TAF5 88 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 DTX3LQ8TDB6 740 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ACTRT1Q8TDG2 376 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 NAT6Q93015 286 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ART4Q93070 314 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 RFKQ969G6 155 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 C12orf66Q96MD2 445 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 TTC25Q96NG3 672 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 BIRC8Q96P09 236 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 RANBP9Q96S59 729 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 COPS8Q99627 209 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 TIMM29Q9BSF4 260 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CCM2Q9BSQ5 444 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 KIFC1Q9BW19 673 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 TRIM31Q9BZY9 425 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 P2RY12Q9H244 342 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 OR52A5Q9H2C5 316 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 PRORYQ9H606 182 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 RMI1Q9H9A7 625 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 COG4Q9H9E3 785 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 FAM60AQ9NP50 221 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 IMP3Q9NV31 184 aaKnown RBP4.09□□□□□ -1.75
SPG11-211ENST00000558561 PDP2Q9P2J9 529 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 IKZF3Q9UKT9 509 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 CRYL1Q9Y2S2 319 aa4.09□□□□□ -1.75
SPG11-211ENST00000558561 ITPR1Q14643 2758 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 LOC400499M0QZD8 3231 aa4.08□□□□□ -1.76
SPG11-211ENST00000558561 A0A087WV48 116 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms