RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MUTYHQ9UIF7 546 aa11.34□□□□□ -0.59
VIPAS39-211ENST00000557658 PRAMEF25A6NGN4 478 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 J3KTA2 159 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 SH3BGRLO75368 114 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 CNR2P34972 360 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 RPS5P46782 204 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 LIMS1P48059 325 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 HMGA2P52926 109 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 TBRG1Q3YBR2 411 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 SPIN4Q56A73 249 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 USP45Q70EL2 814 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 AQP11Q8NBQ7 271 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM46DQ8NEK8 389 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 OR52N2Q8NGI0 321 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 CXorf40BQ96DE9 158 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 SCRN2Q96FV2 425 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 DMRTB1Q96MA1 342 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 WDFY2Q96P53 400 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC35A5Q9BS91 424 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 BHLHE41Q9C0J9 482 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 RACGAP1Q9H0H5 632 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 GPATCH2Q9NW75 528 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 SEC14L4Q9UDX3 406 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 MBD1Q9UIS9 605 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 V9GYH0 126 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 MEIOCA2RUB1 952 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 A8MV72 311 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 FADS2P1A8MWK0 482 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 ETHE1O95571 254 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 IL7P13232 177 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 ATP1B2P14415 290 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 PSMA1P25786 263 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 TIA1P31483 386 aaKnown RBP eCLIP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 CSTF2P33240 577 aaKnown RBP eCLIP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 OR1D2P34982 312 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 PCDH1Q08174 1060 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 PLD1Q13393 1074 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 FRMPD2BQ6IN97 320 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF852Q6ZMS4 543 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 PSD4Q8NDX1 1056 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 GPR156Q8NFN8 814 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 GOT1L1Q8NHS2 421 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 BARHL1Q9BZE3 327 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 TMEM38AQ9H6F2 299 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 TRPV5Q9NQA5 729 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 HCSTQ9UBK5 93 aa11.33□□□□□ -0.6
VIPAS39-211ENST00000557658 ANAPC1Q9H1A4 1944 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ARRDC5A6NEK1 342 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 GLTPD2A6NH11 291 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 H3BM21 787 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CELF2O95319 508 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ENDOUP21128 410 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 POU1F1P28069 291 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 GATMP50440 423 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 RACK1P63244 317 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 HBA1P69905 142 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 PSPHP78330 225 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CDK6Q00534 326 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 PTSQ03393 145 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SCN1BQ07699 218 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 BAK1Q16611 211 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF630Q2M218 657 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CYP27C1Q4G0S4 372 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ZDHHC20Q5W0Z9 365 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 TRIM40Q6P9F5 258 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 TRAF7Q6Q0C0 670 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 KLHL17Q6TDP4 642 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 RFLNAQ6ZTI6 216 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 METTL3Q86U44 580 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 TAGAPQ8N103 731 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 OXR1Q8N573 874 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 OR4K1Q8NGD4 311 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CASD1Q96PB1 797 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SNTG1Q9NSN8 517 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ATP6V1HQ9UI12 483 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ENPP4Q9Y6X5 453 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC35F4A4IF30 521 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 RHCEP18577 417 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 AZGP1P25311 298 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 DOC2BQ14184 412 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 GANABQ14697 944 aaKnown RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 ZMAT1Q5H9K5 638 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CRB2Q5IJ48 1285 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 MEDAGQ5VYS4 303 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 CCSAPQ6IQ19 270 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC8B1Q6J4K2 584 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 OR2AP1Q8NGE2 309 aa11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 VANGL1Q8TAA9 524 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-211ENST00000557658 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms