RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LAMA4Q16363 1823 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 ANKRD31Q8N7Z5 1873 aa3.2□□□□□ -1.9
VRK1-207ENST00000557352 RIC1Q4ADV7 1423 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 LRRC37AA6NMS7 1700 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 ERVV-1B6SEH8 477 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 TLX2O43763 284 aaPredicted RBP3.19□□□□□ -1.9
VRK1-207ENST00000557352 EIF5BO60841 1220 aaKnown RBP3.19□□□□□ -1.9
VRK1-207ENST00000557352 STARD3NLO95772 234 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 IGHDP01880 384 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 ALOX12P18054 663 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 HSPA1LP34931 641 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 LMAN1P49257 510 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 NUCB1Q02818 461 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 CHAF1BQ13112 559 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 SRSF9Q13242 221 aaKnown RBP eCLIP3.19□□□□□ -1.9
VRK1-207ENST00000557352 CUL3Q13618 768 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 ZNF146Q15072 292 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 RILPL1Q5EBL4 403 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 TICAM2Q86XR7 235 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 OR4N5Q8IXE1 308 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 PI4KAP1Q8N8J0 262 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 NSUN4Q96CB9 384 aaKnown RBP3.19□□□□□ -1.9
VRK1-207ENST00000557352 ADD3Q9UEY8 706 aaKnown RBP3.19□□□□□ -1.9
VRK1-207ENST00000557352 BAIAP2L1Q9UHR4 511 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 RPS6KL1Q9Y6S9 549 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 BRCA1P38398 1863 aaKnown RBP3.19□□□□□ -1.9
VRK1-207ENST00000557352 CACNA1SQ13698 1873 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 CDK5RAP2Q96SN8 1893 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 FOCADQ5VW36 1801 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 AFF2P51816 1311 aa3.19□□□□□ -1.9
VRK1-207ENST00000557352 MAST2Q6P0Q8 1798 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 PALLDQ8WX93 1383 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 A0A087WWV3 80 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 A0A1W2PPK0 400 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 A0A1W2PPM1 405 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 CASTOR2A6NHX0 329 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 SURF4O15260 269 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 UBTFL1P0CB47 393 aaPredicted RBP3.18□□□□□ -1.9
VRK1-207ENST00000557352 AOC1P19801 751 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 LHX1P48742 406 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 DCDC1P59894 354 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 SLC39A6Q13433 755 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 C3AR1Q16581 482 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 RABL6Q3YEC7 729 aaPredicted RBP3.18□□□□□ -1.9
VRK1-207ENST00000557352 HSP90AB3PQ58FF7 597 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 SPATA1Q5VX52 437 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 FAM205BPQ63HN1 556 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 ADCK1Q86TW2 530 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 SLC34A3Q8N130 599 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 Q8N7P7 452 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 NOA1Q8NC60 698 aaKnown RBP3.18□□□□□ -1.9
VRK1-207ENST00000557352 CCDC191Q8NCU4 936 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 KLHL30-AS1Q8NEE0 82 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 MOB3AQ96BX8 217 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 RSRC1Q96IZ7 334 aaKnown RBP3.18□□□□□ -1.9
VRK1-207ENST00000557352 CYYR1Q96J86 154 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 PRRG4Q9BZD6 226 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 CCDC68Q9H2F9 335 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 EGLN3Q9H6Z9 239 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.18□□□□□ -1.9
VRK1-207ENST00000557352 TBC1D29Q9UFV1 150 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 VPS28Q9UK41 221 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 USP16Q9Y5T5 823 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 MYH6P13533 1939 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 MYH8P13535 1937 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 TCHHQ07283 1943 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 LTBP1Q14766 1721 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 MAP3K15Q6ZN16 1313 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 CDHR2Q9BYE9 1310 aa3.18□□□□□ -1.9
VRK1-207ENST00000557352 USP42Q9H9J4 1324 aaKnown RBP3.18□□□□□ -1.9
VRK1-207ENST00000557352 DUOX1Q9NRD9 1551 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 ECM29Q5VYK3 1845 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 RTL9Q8NET4 1388 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 hCG_1807616A0A1W2PRN6 198 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 A8MV72 311 aaPredicted RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 CCL24O00175 119 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 IGKV5-2P06315 115 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 EIF2S2P20042 333 aaKnown RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 ALDH1B1P30837 517 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 FKBP3Q00688 224 aaKnown RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 PRKG2Q13237 762 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 GCKRQ14397 625 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 WTAPQ15007 396 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 BMP2KLQ5H9B9 411 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 CLEC4GQ6UXB4 293 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 COPS6Q7L5N1 327 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 RNF130Q86XS8 419 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 GPC2Q8N158 579 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 FGFRL1Q8N441 504 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 TSPAN14Q8NG11 270 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 OR52B6Q8NGF0 335 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 OR4D10Q8NGI6 311 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 METTL21AQ8WXB1 218 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 ZNF830Q96NB3 372 aaPredicted RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 CDCA3Q99618 268 aaPredicted RBP3.17□□□□□ -1.9
VRK1-207ENST00000557352 JPT2Q9H910 190 aa3.17□□□□□ -1.9
VRK1-207ENST00000557352 NSMCE4AQ9NXX6 385 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms