RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RPA1P27694 616 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 UGT1A5P35504 534 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 UBA7P41226 1012 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 PSMD8P48556 350 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 FMO5P49326 533 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 MFAP3P55082 362 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 ASIC1P78348 528 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 PRAMEP78395 509 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 MRPS34P82930 218 aaKnown RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 KLRB1Q12918 225 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 GTF2H2Q13888 395 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 TRIM29Q14134 588 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 MAPRE1Q15691 268 aaKnown RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 DEFB133Q30KQ1 61 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 DEFB109BQ30KR1 87 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 LACTB2Q53H82 288 aaPredicted RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 C10orf120Q5SQS8 335 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 HAUS3Q68CZ6 603 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 GTF2H2CQ6P1K8 395 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 GUSBP11Q6P575 273 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 DPPA4Q7L190 304 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 CHST9Q7L1S5 443 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 R3HCC1LQ7Z5L2 792 aaKnown RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 FOXRED2Q8IWF2 684 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 CD302Q8IX05 232 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 DIS3L2Q8IYB7 885 aaKnown RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 C1orf87Q8N0U7 546 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 TMEM86AQ8N2M4 240 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 ZNF441Q8N8Z8 693 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 Q8N9G6 341 aaPredicted RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 OR2T34Q8NGX1 318 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 OR4C6Q8NH72 309 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 LMX1AQ8TE12 382 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 HTR3CQ8WXA8 447 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 ABTB1Q969K4 478 aaPredicted RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 INTS12Q96CB8 462 aaKnown RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 ARHGEF26Q96DR7 871 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 RRNAD1Q96FB5 475 aaKnown RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 PCED1BQ96HM7 432 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 SPATA17Q96L03 361 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 KCNK16Q96T55 309 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 ADNPQ9H2P0 1102 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 ACSS1Q9NUB1 689 aaPredicted RBP3.6□□□□□ -1.83
CHD8-212ENST00000557329 IRAK4Q9NWZ3 460 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 ZNF69Q9UC07 566 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 SUN2Q9UH99 717 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 RASAL2Q9UJF2 1139 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 FBXL2Q9UKC9 423 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 CDH9Q9ULB4 789 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 MTMR6Q9Y217 621 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 LRRK1Q38SD2 2015 aa3.6□□□□□ -1.83
CHD8-212ENST00000557329 CSMD1Q96PZ7 3565 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 POLQO75417 2590 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 DOCK9Q9BZ29 2069 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 ZFHX3Q15911 3703 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 PLXNA2O75051 1894 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 A0A1W2PNU3 283 aaPredicted RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 GOLGA8IPA6NC78 632 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 GOLGA8JA6NMD2 632 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 A8MXQ7 604 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 CDRT15L2A8MXV6 281 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 P2RY10O00398 339 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 CASC3O15234 703 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 ZNHIT1O43257 154 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 HCRTR2O43614 444 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 TIMM44O43615 452 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 LMX1BO60663 402 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 CLDN1O95832 211 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 HIST1H2ABP04908 130 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 ATP5BP06576 529 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 SP1P08047 785 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 SPARCP09486 303 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 POLR2CP19387 275 aaPredicted RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 POLR2EP19388 210 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 HIST1H2ADP20671 130 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 CDKN1AP38936 164 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 MAGEA11P43364 429 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 RXRGP48443 463 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 RBP5P82980 135 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 NIPAL4Q0D2K0 466 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 C1orf61Q13536 156 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 CFAP221Q4G0U5 840 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 OTUD3Q5T2D3 398 aaPredicted RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 SFMBT2Q5VUG0 894 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 KRT79Q5XKE5 535 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 QSOX2Q6ZRP7 698 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 RSRC2Q7L4I2 434 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 HIST3H2AQ7L7L0 130 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 EPHX4Q8IUS5 362 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 MCEMP1Q8IX19 187 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 PCDH20Q8N6Y1 951 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 OR13A1Q8NGR1 328 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 SPATA22Q8NHS9 363 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 PPP4R1Q8TF05 950 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 ARHGEF2Q92974 986 aaKnown RBP3.59□□□□□ -1.83
CHD8-212ENST00000557329 ORAI1Q96D31 301 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 NODALQ96S42 347 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 TSPAN18Q96SJ8 248 aa3.59□□□□□ -1.83
CHD8-212ENST00000557329 IL12RB2Q99665 862 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms