RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 BEND6Q5SZJ8 279 aaPredicted RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 HIST2H2AA3Q6FI13 130 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 MED27Q6P2C8 311 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 ABHD17CQ6PCB6 329 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 KIRREL2Q6UWL6 708 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 ZYG11AQ6WRX3 759 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 RPS27LQ71UM5 84 aaKnown RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 C4orf33Q8N1A6 199 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 BANPQ8N9N5 519 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 OR5T3Q8NGG3 340 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 OR51Q1Q8NH59 317 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 WDR20Q8TBZ3 569 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 APOBEC4Q8WW27 367 aaKnown RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 UBE2E3Q969T4 207 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 MIEF2Q96C03 454 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 L3HYPDHQ96EM0 354 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 IP6K3Q96PC2 410 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 TMEM237Q96Q45 408 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 MESP1Q9BRJ9 268 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 MS4A8Q9BY19 250 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 C12orf65Q9H3J6 166 aaKnown RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 SOX17Q9H6I2 414 aaPredicted RBP9.12□□□□□ -0.95
SRP54-210ENST00000556380 PRDM7Q9NQW5 492 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 ACSS2Q9NR19 701 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 MKS1Q9NXB0 559 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 PSD3Q9NYI0 1048 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 GRID1Q9ULK0 1009 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 ANGPTL3Q9Y5C1 460 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 HS3ST3B1Q9Y662 390 aa9.12□□□□□ -0.95
SRP54-210ENST00000556380 FASNP49327 2511 aaKnown RBP9.11□□□□□ -0.95
SRP54-210ENST00000556380 HELZ2Q9BYK8 2649 aaKnown RBP9.11□□□□□ -0.95
SRP54-210ENST00000556380 SCN3AQ9NY46 2000 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CCDC151A5D8V7 595 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 URADA6NGE7 173 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 ZNF860A6NHJ4 632 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 ANKDD1BA6NHY2 528 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 IDSB3KWA1 339 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 COPEO14579 308 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CEACAM4O75871 244 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CLDN9O95484 217 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 IGHEP01854 428 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 FAM87AP0C7U9 286 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CREB1P16220 341 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 TAC1P20366 129 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 IL10P22301 178 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 SERPINB1P30740 379 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 OTX2P32243 289 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 EMP2P54851 167 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CDH13P55290 713 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CLCQ05315 142 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 RUNX2Q13950 521 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CCDC153Q494R4 210 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 GGTA1PQ4G0N0 100 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 DEPDC1Q5TB30 811 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CPZQ66K79 652 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 NIPAL1Q6NVV3 410 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 TMEM205Q6UW68 189 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 ABHD13Q7L211 337 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 RAB43Q86YS6 212 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 PRSS58Q8IYP2 241 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 RNF175Q8N4F7 328 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 OR2L5Q8NG80 312 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 HUS1BQ8NHY5 278 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 GAL3ST3Q96A11 431 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 ZIM3Q96PE6 472 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 F2RL3Q96RI0 385 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CRB3Q9BUF7 120 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 TRIM55Q9BYV6 548 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 SEMA4CQ9C0C4 833 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 REXO4Q9GZR2 422 aaKnown RBP9.11□□□□□ -0.95
SRP54-210ENST00000556380 ING2Q9H160 280 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 ACTR8Q9H981 624 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 LANCL2Q9NS86 450 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 SEMA3GQ9NS98 782 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 C14orf105Q9NVL8 296 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 P4HTMQ9NXG6 502 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 HCN3Q9P1Z3 774 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 ADGRE2Q9UHX3 823 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 C3orf18Q9UK00 162 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 PPT2Q9UMR5 302 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 MAN2B2Q9Y2E5 1009 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 PLLPQ9Y342 182 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 PCDHGA11Q9Y5H2 935 aa9.11□□□□□ -0.95
SRP54-210ENST00000556380 CNTRLQ7Z7A1 2325 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 LOC102723996A0A087X1L8 192 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OR2W5A6NFC9 320 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 AGPSO00116 658 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 FOXE1O00358 373 aaPredicted RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 ERI3O43414 337 aaKnown RBP9.1□□□□□ -0.95
SRP54-210ENST00000556380 TYROBPO43914 113 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 SCELO95171 688 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 CYC1P08574 325 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 TSPAN8P19075 237 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 XCR1P46094 333 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 NEK2P51955 445 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 CCNG1P51959 295 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 POLE2P56282 527 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 SOX8P57073 446 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 DNAJB13P59910 316 aa9.1□□□□□ -0.95
SRP54-210ENST00000556380 OLR1P78380 273 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms