RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 STAT5AP42229 794 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 OR1D4P47884 311 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 FOXA1P55317 472 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 OCRLQ01968 901 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 HYAL2Q12891 473 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SLC9A5Q14940 896 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ABRAXAS2Q15018 415 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 NR6A1Q15406 480 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SPIN4Q56A73 249 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 TCHHL1Q5QJ38 904 aaPredicted RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 MLIPQ5VWP3 458 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 OR4C11Q6IEV9 310 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ADNP2Q6IQ32 1131 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 CYP20A1Q6UW02 462 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SCIMPQ6UWF3 145 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 UNQ6494/PRO21346Q6UXR6 183 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 LRRC69Q6ZNQ3 347 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 OVCH1Q7RTY7 1134 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 DTX1Q86Y01 620 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 WDR75Q8IWA0 830 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 ZCCHC7Q8N3Z6 543 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 ARHGEF39Q8N4T4 335 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ZNF781Q8N8C0 355 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SLC38A9Q8NBW4 561 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 C7orf57Q8NEG2 295 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 OR9A4Q8NGU2 314 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 PIWIL2Q8TC59 973 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 TWIST2Q8WVJ9 160 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 GATA6Q92908 595 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 NKD1Q969G9 470 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SMIM10Q96HG1 83 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 VPS50Q96JG6 964 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 PPP3R2Q96LZ3 170 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 GPR87Q9BY21 358 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ACPTQ9BZG2 426 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 DPH1Q9BZG8 443 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 CHST8Q9H2A9 424 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 KLHL31Q9H511 634 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 SYNPO2LQ9H987 977 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 GPN2Q9H9Y4 310 aaPredicted RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 WDR41Q9HAD4 459 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 MKKSQ9NPJ1 570 aaPredicted RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 FARSBQ9NSD9 589 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 C14orf105Q9NVL8 296 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 MS4A12Q9NXJ0 267 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ZNF282Q9UDV7 671 aaPredicted RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 ZDHHC2Q9UIJ5 367 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 PHF11Q9UIL8 331 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ADAM29Q9UKF5 820 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 MRPS33Q9Y291 106 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 MRPS2Q9Y399 296 aaKnown RBP7.24□□□□□ -1.25
TDP1-214ENST00000556063 DNAJC15Q9Y5T4 150 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 MAU2Q9Y6X3 613 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 ACACBO00763 2458 aa7.24□□□□□ -1.25
TDP1-214ENST00000556063 CROCCQ5TZA2 2017 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 DMDP11532 3685 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 A0A0G2JN53 185 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 BLACEA4D250 179 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TMEM233B4DJY2 109 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TCP11X1B4DZS4 312 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 NPIPB8E9PQR5 432 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 SGK494L7N484 410 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 SAP18O00422 153 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 CLDN4O14493 209 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 PLPP1O14494 284 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 PIP5K1BO14986 540 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 HDAC3O15379 428 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CHST10O43529 356 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 SEC22BO75396 215 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 RDH16O75452 317 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 SKAP2O75563 359 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 SCELO95171 688 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CYC1P08574 325 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 LINC00032P0C843 101 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 PCSK2P16519 638 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 ATP5A1P25705 553 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 MAPK1P28482 360 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TLX1P31314 330 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 ARRB2P32121 409 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 DLSTP36957 453 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 MDH1P40925 334 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 FOLR3P41439 243 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 GSTM5P46439 218 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 HTR6P50406 440 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 MAPK12P53778 367 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 MC1RQ01726 317 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 BTKQ06187 659 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 MAD2L1Q13257 205 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 DNASE1L3Q13609 305 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 NCF4Q15080 339 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 UGT3A2Q3SY77 523 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 TUBB8Q3ZCM7 444 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 ATP6AP1LQ52LC2 224 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 CCNYL2Q5T2Q4 361 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 BROXQ5VW32 411 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 ZNF385CQ66K41 422 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 ZNF517Q6ZMY9 492 aaPredicted RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 TIPARPQ7Z3E1 657 aaKnown RBP7.23□□□□□ -1.25
TDP1-214ENST00000556063 COMMD6Q7Z4G1 85 aa7.23□□□□□ -1.25
TDP1-214ENST00000556063 PARP9Q8IXQ6 854 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms