RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PKP4Q99569 1192 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 SLC17A9Q9BYT1 436 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TRIM8Q9BZR9 551 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ATG10Q9H0Y0 220 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 WDR26Q9H7D7 661 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 LRTM1Q9HBL6 345 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ITM2CQ9NQX7 267 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 GPRC5BQ9NZH0 403 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ADA2Q9NZK5 511 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 STOX2Q9P2F5 926 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 STOML1Q9UBI4 398 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ZNHIT2Q9UHR6 403 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 LEF1Q9UJU2 399 aaPredicted RBP6.56□□□□□ -1.36
SLIRP-204ENST00000555890 CROTQ9UKG9 612 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ACSL5Q9ULC5 683 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 TMEM98Q9Y2Y6 226 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 ST14Q9Y5Y6 855 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 KCNE2Q9Y6J6 123 aa6.56□□□□□ -1.36
SLIRP-204ENST00000555890 PLXND1Q9Y4D7 1925 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 DOCK9Q9BZ29 2069 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 A0A1W2PQF6 199 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 KIAA1324LA8MWY0 1029 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 H0Y3Z8 333 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 CACNB4O00305 520 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 TRIM38O00635 465 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 FBP2O00757 339 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 AQP7O14520 342 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 LSM1O15116 133 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ADAM23O75077 832 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 RSL1D1O76021 490 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PDE5AO76074 875 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 MYO1DO94832 1006 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 APBB3O95704 486 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 NPPAP01160 153 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PRPS2P11908 318 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 KELP23276 732 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 TRIM23P36406 574 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 BDKRB1P46663 353 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 DIO3P55073 304 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 NME5P56597 212 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SLC34A1Q06495 639 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 FOXM1Q08050 763 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 CSTF3Q12996 717 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PRKG2Q13237 762 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 LAPTM5Q13571 262 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 RCN1Q15293 331 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 IRF4Q15306 451 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 HIST2H2ACQ16777 129 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SPATS1Q496A3 300 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF658BQ4V348 819 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 XKR6Q5GH73 641 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SAMD4BQ5PRF9 694 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SLC35F1Q5T1Q4 408 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 C10orf62Q5T681 223 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 FHL5Q5TD97 284 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 HIST2H2AA3Q6FI13 130 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ARMCX6Q7L4S7 300 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SYT13Q7L8C5 426 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ZFAND4Q86XD8 727 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 HPS6Q86YV9 775 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 FUNDC1Q8IVP5 155 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF547Q8IVP9 402 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SYTL1Q8IYJ3 562 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 RAB42Q8N4Z0 105 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 OXR1Q8N573 874 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 TP53I13Q8NBR0 393 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 TMEM145Q8NBT3 493 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 GLB1L3Q8NCI6 653 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 OR9I1Q8NGQ6 314 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 OR56A3Q8NH54 315 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 DNAJB8Q8NHS0 232 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 HMGCLL1Q8TB92 370 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 FAM131CQ96AQ9 280 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PYCR2Q96C36 320 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SPDL1Q96EA4 605 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 C1orf50Q9BV19 199 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ASPNQ9BXN1 380 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ZNF700Q9H0M5 742 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 CD248Q9HCU0 757 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SPAG4Q9NPE6 437 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 MBNL1Q9NR56 388 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 NMRK1Q9NWW6 199 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 C1orf109Q9NX04 203 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 ASIC5Q9NY37 505 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PRR13Q9NZ81 148 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 STX18Q9P2W9 335 aaKnown RBP6.55□□□□□ -1.36
SLIRP-204ENST00000555890 SERGEFQ9UGK8 458 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 PILRBQ9UKJ0 227 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 POMPQ9Y244 141 aa6.55□□□□□ -1.36
SLIRP-204ENST00000555890 RTTNQ86VV8 2226 aa6.54□□□□□ -1.36
SLIRP-204ENST00000555890 MED13Q9UHV7 2174 aa6.54□□□□□ -1.36
SLIRP-204ENST00000555890 KCNE1BA0A087WTH5 132 aa6.54□□□□□ -1.36
SLIRP-204ENST00000555890 C15orf38-AP3S2A0A0A6YYH1 394 aa6.54□□□□□ -1.36
SLIRP-204ENST00000555890 LRRC72A6NJI9 287 aa6.54□□□□□ -1.36
SLIRP-204ENST00000555890 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
SLIRP-204ENST00000555890 EEDO75530 441 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms