RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PANO1I0J062 215 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 SLC33A1O00400 549 aaPredicted RBP1.87□□□□□ -2.11
SRP54-207ENST00000555535 FBP2O00757 339 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 TADA2AO75478 443 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 ANGPTL1O95841 491 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 ABCB1P08183 1280 aaPredicted RBP1.87□□□□□ -2.11
SRP54-207ENST00000555535 ZNF853P0CG23 659 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 CD1EP15812 388 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 HSD17B3P37058 310 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 EVCP57679 992 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 RPS27AP62979 156 aaKnown RBP1.87□□□□□ -2.11
SRP54-207ENST00000555535 RBPJQ06330 500 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 GRB14Q14449 540 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 SHHQ15465 462 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 MEA1Q16626 185 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 LRRC37A5PQ49AS3 106 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 ZNF544Q6NX49 715 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 COX8CQ7Z4L0 72 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 PRUNE1Q86TP1 453 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 UBQLNLQ8IYU4 475 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 TTC30BQ8N4P2 665 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 ZNF564Q8TBZ8 553 aaPredicted RBP1.87□□□□□ -2.11
SRP54-207ENST00000555535 CD99L2Q8TCZ2 262 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 SPATA33Q96N06 139 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 SIGLEC12Q96PQ1 595 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 MXD3Q9BW11 206 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 HES7Q9BYE0 225 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 IARS2Q9NSE4 1012 aaKnown RBP1.87□□□□□ -2.11
SRP54-207ENST00000555535 MGAT4AQ9UM21 535 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 SATB2Q9UPW6 733 aa1.87□□□□□ -2.11
SRP54-207ENST00000555535 TNFSF11O14788 317 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 FRAT2O75474 233 aaPredicted RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 RHBDL1O75783 438 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 LYPD3O95274 346 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 P0C879 139 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 ALOX12P18054 663 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 ACHEP22303 614 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 MDH2P40926 338 aaKnown RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 ZNF133P52736 654 aaPredicted RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 HMGCS2P54868 508 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 MTCP1P56278 107 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 PEX3P56589 373 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 GEMIN4P57678 1058 aaKnown RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 CUL4AQ13619 759 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 ECSCRQ19T08 205 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 GSG1Q2KHT4 349 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 C4orf50Q6ZRC1 276 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 NUFIP2Q7Z417 695 aaKnown RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 PRSS35Q8N3Z0 413 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 LINC01006Q8NI28 216 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 PCDHB18PQ96TA0 734 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 ZBP1Q9H171 429 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 XAB2Q9HCS7 855 aaKnown RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.86□□□□□ -2.11
SRP54-207ENST00000555535 EXOC1Q9NV70 894 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 CPSF2Q9P2I0 782 aaKnown RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 RPS6KB2Q9UBS0 482 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 UBQLN2Q9UHD9 624 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 AGTPBP1Q9UPW5 1226 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 TMEM5Q9Y2B1 443 aa1.86□□□□□ -2.11
SRP54-207ENST00000555535 MAGED1Q9Y5V3 778 aaPredicted RBP1.86□□□□□ -2.11
SRP54-207ENST00000555535 FOXI3A8MTJ6 420 aaPredicted RBP1.85□□□□□ -2.11
SRP54-207ENST00000555535 TCP10L2B9ZVM9 353 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 SCO2O43819 266 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 PSMD10O75832 226 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 GOT1P17174 413 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 GPX3P22352 226 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 RPL9P32969 192 aaKnown RBP1.85□□□□□ -2.11
SRP54-207ENST00000555535 MC5RP33032 325 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 SNTB1Q13884 538 aaKnown RBP1.85□□□□□ -2.11
SRP54-207ENST00000555535 ISXQ2M1V0 245 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 C17orf58Q2M2W7 97 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 ZNF542PQ5EBM4 170 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 ZRANB3Q5FWF4 1079 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 FUT10Q6P4F1 479 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 MACC1Q6ZN28 852 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 APCDD1Q8J025 514 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 P2RX5Q93086 422 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 SPSB1Q96BD6 273 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 ALKBH7Q9BT30 221 aaPredicted RBP1.85□□□□□ -2.11
SRP54-207ENST00000555535 PAXXQ9BUH6 204 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 PINK1Q9BXM7 581 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 TBC1D22BQ9NU19 505 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 MOKQ9UQ07 419 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 FBXO7Q9Y3I1 522 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 ARID1AO14497 2285 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 MEGF6O75095 1541 aa1.85□□□□□ -2.11
SRP54-207ENST00000555535 BCLAF3A2AJT9 711 aaKnown RBP1.84□□□□□ -2.11
SRP54-207ENST00000555535 ZNF487B1APH4 448 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 E5RGE8 158 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 SAP18O00422 153 aaKnown RBP1.84□□□□□ -2.11
SRP54-207ENST00000555535 LRRTM2O43300 516 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 CREB3O43889 395 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 PRAF2O60831 178 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ODC1P11926 461 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 EEF1B2P24534 225 aaKnown RBP1.84□□□□□ -2.11
SRP54-207ENST00000555535 CTNNA2P26232 953 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 GDF1P27539 372 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 ACTN2P35609 894 aa1.84□□□□□ -2.11
SRP54-207ENST00000555535 HMGCLP35914 325 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms