RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TXNDC15Q96J42 360 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 SLC30A2Q9BRI3 323 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 SYT17Q9BSW7 474 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 TMEM39AQ9NV64 488 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 COQ3Q9NZJ6 369 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 B4GALT6Q9UBX8 382 aa16.37■□□□□ 0.21
PPP4R3A-208ENST00000555462 GBF1Q92538 1859 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR10H3O60404 316 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 CDRT1O95170 752 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GPX2P18283 190 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 SOX6P35712 828 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 MAGEA11P43364 429 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 MRPL19P49406 292 aaKnown RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 RNF144AP50876 292 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 CSTF3Q12996 717 aaKnown RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 SCARB2Q14108 478 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 DPY19L3Q6ZPD9 716 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 TCEANCQ8N8B7 351 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 C11orf65Q8NCR3 313 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 IL17FQ96PD4 163 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GPR52Q9Y2T5 361 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 CENPXA8MT69 81 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 H7C0S8 307 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 HOXC11O43248 304 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GADD45GO95257 159 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 KLK1P06870 262 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GALTP07902 379 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 HMGA1P17096 107 aaKnown RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 CTSCP53634 463 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 C2orf80Q0P641 193 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 CNTN1Q12860 1018 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 LMAN2Q12907 356 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 TCTN1Q2MV58 587 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 IQCCQ4KMZ1 466 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 AGAP6Q5VW22 663 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 C22orf42Q6IC83 251 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 PNCKQ6P2M8 343 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 FAHD1Q6P587 224 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 KBTBD8Q8NFY9 601 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 CEP295NLQ96MC4 621 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 AGAP4Q96P64 663 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR4K3Q96R72 315 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 YIPF4Q9BSR8 244 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 TVP23BQ9NYZ1 205 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 MAN2B2Q9Y2E5 1009 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 ANKDD1BA6NHY2 528 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 ARHGEF33A8MVX0 844 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 TSPAN6O43657 245 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 ATN1P54259 1190 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 MPPE1Q53F39 396 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZNF517Q6ZMY9 492 aaPredicted RBP16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GALNT13Q8IUC8 556 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 NPAS3Q8IXF0 933 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GHDCQ8N2G8 530 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 ARSGQ96EG1 525 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 SLX1AQ9BQ83 275 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 HTATIP2Q9BUP3 242 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 GIMAP4Q9NUV9 329 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 ITM2BQ9Y287 266 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 SNX11Q9Y5W9 270 aa16.36■□□□□ 0.21
PPP4R3A-208ENST00000555462 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 TRBC2A0A5B9 178 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR6C75A6NL08 312 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 TMCC2O75069 709 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 AOC2O75106 756 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 NCR1O76036 304 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 SERPIND1P05546 499 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR56A5P0C7T3 313 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 CYBAP13498 195 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 PRSS53Q2L4Q9 553 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 ZNF181Q2M3W8 571 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR2G6Q5TZ20 316 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 IPCEF1Q8WWN9 437 aaPredicted RBP16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 NEIL2Q969S2 332 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 ART5Q96L15 291 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 TM9SF2Q99805 663 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 POLR2J2Q9GZM3 115 aaKnown RBP16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 COMMD3Q9UBI1 195 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 PCDHGA2Q9Y5H1 932 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 ATG2BQ96BY7 2078 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 GSAPA4D1B5 854 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 S100A1P23297 94 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 CHMP24386 653 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 TAS2R50P59544 299 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 MRPL58Q14197 206 aaKnown RBP16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 SPDYE7PQ495Y7 208 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 SYTL3Q4VX76 610 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 Q5BKY6 102 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 DNAJB7Q7Z6W7 309 aaPredicted RBP16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 OR6F1Q8NGZ6 308 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 ASB11Q8WXH4 323 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 COL21A1Q96P44 957 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 CFAP97Q9P2B7 532 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 TRIOO75962 3097 aa16.35■□□□□ 0.21
PPP4R3A-208ENST00000555462 KCNE1BA0A087WTH5 132 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 NOTOA8MTQ0 251 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SYN3O14994 580 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 SCAMP1O15126 338 aa16.34■□□□□ 0.21
PPP4R3A-208ENST00000555462 ADAMDEC1O15204 470 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms